EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0015651 (Gene tree)
Gene ID: -
Gene Symbol: Lrrfip1
Alias: AU024550|FLAP (FLI LRR associated protein)|Flap|Fliiap1
Full Name: leucine rich repeat (in FLII) interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 142341 bases
Position: chr1:91384884-91527224
Accession: 1342770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0020544	LRRFIP	PF09738.9	4.9e-105	1	1
MGP_CASTEiJ_P0020549	LRRFIP	PF09738.9	9e-90	1	3
MGP_CASTEiJ_P0020549	LRRFIP	PF09738.9	9e-90	2	3
MGP_CASTEiJ_P0020549	LRRFIP	PF09738.9	9e-90	3	3
MGP_CASTEiJ_P0020547	LRRFIP	PF09738.9	3.8e-89	1	2
MGP_CASTEiJ_P0020547	LRRFIP	PF09738.9	3.8e-89	2	2
MGP_CASTEiJ_P0020545	LRRFIP	PF09738.9	7.1e-89	1	2
MGP_CASTEiJ_P0020545	LRRFIP	PF09738.9	7.1e-89	2	2
MGP_CASTEiJ_P0020546	LRRFIP	PF09738.9	4.3e-85	1	1
MGP_CASTEiJ_P0020543	LRRFIP	PF09738.9	2e-81	1	3
MGP_CASTEiJ_P0020543	LRRFIP	PF09738.9	2e-81	2	3
MGP_CASTEiJ_P0020543	LRRFIP	PF09738.9	2e-81	3	3
MGP_CASTEiJ_P0020542	LRRFIP	PF09738.9	2.8e-65	1	2
MGP_CASTEiJ_P0020542	LRRFIP	PF09738.9	2.8e-65	2	2
MGP_CASTEiJ_P0020548	LRRFIP	PF09738.9	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0020542	-	1031	XM_006529175	MGP_CASTEiJ_P0020542	323 (aa)	XP_006529238	Q3UZ39
MGP_CASTEiJ_T0020543	-	1747	-	MGP_CASTEiJ_P0020543	575 (aa)	-	-
MGP_CASTEiJ_T0020546	-	3670	-	MGP_CASTEiJ_P0020546	729 (aa)	-	-
MGP_CASTEiJ_T0020547	-	2752	-	MGP_CASTEiJ_P0020547	628 (aa)	-	-
MGP_CASTEiJ_T0020544	-	2047	-	MGP_CASTEiJ_P0020544	428 (aa)	-	-
MGP_CASTEiJ_T0020545	-	2871	-	MGP_CASTEiJ_P0020545	638 (aa)	-	-
MGP_CASTEiJ_T0020554	-	504	-	-	- (aa)	-	-
MGP_CASTEiJ_T0020548	-	442	-	MGP_CASTEiJ_P0020548	98 (aa)	-	-
MGP_CASTEiJ_T0020549	-	2150	-	MGP_CASTEiJ_P0020549	663 (aa)	-	-
MGP_CASTEiJ_T0020551	-	578	-	-	- (aa)	-	-
MGP_CASTEiJ_T0020550	-	4028	-	MGP_CASTEiJ_P0020550	913 (aa)	-	-
MGP_CASTEiJ_T0020553	-	215	-	-	- (aa)	-	-
MGP_CASTEiJ_T0020552	-	2544	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0015651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0015651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015651	Lrrfip1	99	60.422	MGP_CASTEiJ_G0034360	Lrrfip2	100	67.630