EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0015691 (Gene tree)
Gene ID: -
Gene Symbol: Hdlbp
Alias: 1110005P14Rik|AA960365|AI118566|D1Ertd101e
Full Name: high density lipoprotein (HDL) binding protein
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 76711 bases
Position: chr1:93914748-93991458
Accession: 99256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	1	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	2	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	3	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	4	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	5	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	6	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	7	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	8	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	9	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	10	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	11	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	12	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	13	14
MGP_CASTEiJ_P0020729	KH_1	PF00013.29	1.7e-188	14	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	1	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	2	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	3	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	4	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	5	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	6	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	7	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	8	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	9	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	10	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	11	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	12	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	13	14
MGP_CASTEiJ_P0020730	KH_1	PF00013.29	1.7e-188	14	14
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	1	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	2	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	3	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	4	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	5	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	6	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	7	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	8	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	9	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	10	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	11	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	12	13
MGP_CASTEiJ_P0020731	KH_1	PF00013.29	3.5e-177	13	13
MGP_CASTEiJ_P0020732	KH_1	PF00013.29	2.3e-81	1	6
MGP_CASTEiJ_P0020732	KH_1	PF00013.29	2.3e-81	2	6
MGP_CASTEiJ_P0020732	KH_1	PF00013.29	2.3e-81	3	6
MGP_CASTEiJ_P0020732	KH_1	PF00013.29	2.3e-81	4	6
MGP_CASTEiJ_P0020732	KH_1	PF00013.29	2.3e-81	5	6
MGP_CASTEiJ_P0020732	KH_1	PF00013.29	2.3e-81	6	6
MGP_CASTEiJ_P0020734	KH_1	PF00013.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0020736	-	850	-	MGP_CASTEiJ_P0020736	129 (aa)	-	-
MGP_CASTEiJ_T0020739	-	3192	-	-	- (aa)	-	-
MGP_CASTEiJ_T0020738	-	341	-	MGP_CASTEiJ_P0020738	22 (aa)	-	-
MGP_CASTEiJ_T0020735	-	671	-	MGP_CASTEiJ_P0020735	141 (aa)	-	-
MGP_CASTEiJ_T0020734	-	740	-	MGP_CASTEiJ_P0020734	178 (aa)	-	-
MGP_CASTEiJ_T0020737	-	634	-	-	- (aa)	-	-
MGP_CASTEiJ_T0020729	-	6231	XM_006529074	MGP_CASTEiJ_P0020729	1268 (aa)	XP_006529137	Q8VDJ3
MGP_CASTEiJ_T0020731	-	3808	-	MGP_CASTEiJ_P0020731	1199 (aa)	-	-
MGP_CASTEiJ_T0020730	-	4427	-	MGP_CASTEiJ_P0020730	1268 (aa)	-	-
MGP_CASTEiJ_T0020733	-	2172	-	-	- (aa)	-	-
MGP_CASTEiJ_T0020732	-	1990	-	MGP_CASTEiJ_P0020732	583 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0015691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015691	Hdlbp	91	46.218	MGP_CASTEiJ_G0035015	4921511C20Rik	100	46.218
MGP_CASTEiJ_G0015691	Hdlbp	94	50.055	MGP_CASTEiJ_G0035014	Gm382	95	50.055