EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0015762 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 14182 bases
Position: chr1:122440904-122455085
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0021067	ResIII	PF04851.15	4.7e-06	1	1
MGP_CASTEiJ_P0021067	DEAD	PF00270.29	1.8e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0021068	-	622	-	-	- (aa)	-	-
MGP_CASTEiJ_T0021069	-	512	-	MGP_CASTEiJ_P0021069	170 (aa)	-	-
MGP_CASTEiJ_T0021067	-	2258	XM_006529794	MGP_CASTEiJ_P0021067	660 (aa)	XP_006529857	Q8K363
MGP_CASTEiJ_T0021070	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0015762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0015762's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015762	Ddx18	50	30.628	MGP_CASTEiJ_G0028995	Ddx51	59	31.070
MGP_CASTEiJ_G0015762	Ddx18	55	32.732	MGP_CASTEiJ_G0018172	Ddx52	68	31.702
MGP_CASTEiJ_G0015762	Ddx18	50	30.699	MGP_CASTEiJ_G0033719	Ddx6	66	30.699
MGP_CASTEiJ_G0015762	Ddx18	53	33.155	MGP_CASTEiJ_G0016265	D1Pas1	56	33.155
MGP_CASTEiJ_G0015762	Ddx18	51	31.085	MGP_CASTEiJ_G0032855	Ddx39	81	30.312
MGP_CASTEiJ_G0015762	Ddx18	56	36.148	MGP_CASTEiJ_G0032713	Ddx49	92	38.066
MGP_CASTEiJ_G0015762	Ddx18	65	36.128	MGP_CASTEiJ_G0024730	Ddx31	72	36.128
MGP_CASTEiJ_G0015762	Ddx18	56	34.974	MGP_CASTEiJ_G0034068	Ddx43	55	34.974
MGP_CASTEiJ_G0015762	Ddx18	52	33.333	MGP_CASTEiJ_G0021336	Ddx17	53	33.333
MGP_CASTEiJ_G0015762	Ddx18	50	34.111	MGP_CASTEiJ_G0019865	Ddx41	54	34.111
MGP_CASTEiJ_G0015762	Ddx18	66	46.241	MGP_CASTEiJ_G0033812	Ddx10	50	46.241
MGP_CASTEiJ_G0015762	Ddx18	57	34.351	MGP_CASTEiJ_G0016635	Ddx50	61	32.867
MGP_CASTEiJ_G0015762	Ddx18	53	33.155	MGP_CASTEiJ_G0034550	Ddx3x	56	33.422
MGP_CASTEiJ_G0015762	Ddx18	68	36.966	MGP_CASTEiJ_G0026082	Ddx27	53	38.221
MGP_CASTEiJ_G0015762	Ddx18	64	32.294	MGP_CASTEiJ_G0029113	Ddx54	50	32.366
MGP_CASTEiJ_G0015762	Ddx18	53	33.144	MGP_CASTEiJ_G0015890	Ddx59	55	33.144
MGP_CASTEiJ_G0015762	Ddx18	68	36.192	MGP_CASTEiJ_G0029202	Ddx55	79	36.042
MGP_CASTEiJ_G0015762	Ddx18	55	38.525	MGP_CASTEiJ_G0030485	Ddx47	88	37.705