EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0015837 (Gene tree)
Gene ID: -
Gene Symbol: Snrpe
Alias: AL022645|C76690|SME
Full Name: small nuclear ribonucleoprotein E
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 7586 bases
Position: chr1:135128197-135135782
Accession: 98346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0021427	LSM	PF01423.22	2.2e-17	1	1
MGP_CASTEiJ_P0021428	LSM	PF01423.22	9.1e-12	1	1
MGP_CASTEiJ_P0021429	LSM	PF01423.22	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0021428	-	669	-	MGP_CASTEiJ_P0021428	91 (aa)	-	-
MGP_CASTEiJ_T0021429	-	75	-	MGP_CASTEiJ_P0021429	25 (aa)	-	-
MGP_CASTEiJ_T0021426	-	653	-	MGP_CASTEiJ_P0021426	69 (aa)	-	P62305
MGP_CASTEiJ_T0021427	-	279	-	MGP_CASTEiJ_P0021427	92 (aa)	-	-
MGP_CASTEiJ_T0021430	-	597	-	MGP_CASTEiJ_P0021430	69 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0015837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0015837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015837	Snrpe	77	32.877	MGP_CASTEiJ_G0029876	Lsm5	76	32.877