EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0015943 (Gene tree)
Gene ID: -
Gene Symbol: Dhx9
Alias: AI326842|Ddx9|HEL-5|NDH II|NDHII|RHA|RNA helicase|leukophysin|mHEL-5|nuclear DNA helicase II
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 40470 bases
Position: chr1:156218512-156258981
Accession: 108177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0021963	dsrm	PF00035.26	1e-26	1	2
MGP_CASTEiJ_P0021963	dsrm	PF00035.26	1e-26	2	2
MGP_CASTEiJ_P0021959	dsrm	PF00035.26	3.7e-26	1	2
MGP_CASTEiJ_P0021959	dsrm	PF00035.26	3.7e-26	2	2
MGP_CASTEiJ_P0021960	dsrm	PF00035.26	3.7e-26	1	2
MGP_CASTEiJ_P0021960	dsrm	PF00035.26	3.7e-26	2	2
MGP_CASTEiJ_P0021963	DEAD	PF00270.29	2.5e-06	1	1
MGP_CASTEiJ_P0021960	DEAD	PF00270.29	7.9e-06	1	1
MGP_CASTEiJ_P0021959	DEAD	PF00270.29	7.9e-06	1	1
MGP_CASTEiJ_P0021960	HA2	PF04408.23	1.2e-14	1	1
MGP_CASTEiJ_P0021959	HA2	PF04408.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0021967	-	1602	-	-	- (aa)	-	-
MGP_CASTEiJ_T0021966	-	2280	-	-	- (aa)	-	-
MGP_CASTEiJ_T0021965	-	2661	-	-	- (aa)	-	-
MGP_CASTEiJ_T0021964	-	658	-	-	- (aa)	-	-
MGP_CASTEiJ_T0021963	-	2346	-	MGP_CASTEiJ_P0021963	735 (aa)	-	-
MGP_CASTEiJ_T0021962	-	2018	-	MGP_CASTEiJ_P0021962	46 (aa)	-	-
MGP_CASTEiJ_T0021961	-	2406	-	MGP_CASTEiJ_P0021961	459 (aa)	-	-
MGP_CASTEiJ_T0021960	-	4560	-	MGP_CASTEiJ_P0021960	1383 (aa)	-	-
MGP_CASTEiJ_T0021958	-	1488	XM_011247918	MGP_CASTEiJ_P0021958	459 (aa)	XP_011246220	A0A087WPL5
MGP_CASTEiJ_T0021959	-	4615	-	MGP_CASTEiJ_P0021959	1384 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015943	Dhx9	53	38.034	MGP_CASTEiJ_G0026427	Dhx36	76	37.613
MGP_CASTEiJ_G0015943	Dhx9	56	47.685	MGP_CASTEiJ_G0023610	Ythdc2	90	35.912
MGP_CASTEiJ_G0015943	Dhx9	52	40.153	MGP_CASTEiJ_G0034331	Dhx30	61	32.861
MGP_CASTEiJ_G0015943	Dhx9	54	35.915	MGP_CASTEiJ_G0023263	Dhx57	63	35.681
MGP_CASTEiJ_G0015943	Dhx9	58	32.593	MGP_CASTEiJ_G0020201	Dhx29	62	32.047
MGP_CASTEiJ_G0015943	Dhx9	54	32.518	MGP_CASTEiJ_G0025980	Dhx35	52	31.051