EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0016197 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpu
Alias: AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U|scaffold attachment factor A
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 14712 bases
Position: chr1:182483162-182497873
Accession: 1858195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0023078	SAP	PF02037.27	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0023081	-	869	-	-	- (aa)	-	-
MGP_CASTEiJ_T0023082	-	672	-	-	- (aa)	-	-
MGP_CASTEiJ_T0023080	-	923	-	-	- (aa)	-	-
MGP_CASTEiJ_T0023079	-	711	-	-	- (aa)	-	-
MGP_CASTEiJ_T0023078	-	7629	-	MGP_CASTEiJ_P0023078	800 (aa)	XP_017177161	Q8VEK3

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0016197	Hnrnpu	55	59.091	MGP_CASTEiJ_G0030923	Hnrnpul1	61	52.000
MGP_CASTEiJ_G0016197	Hnrnpu	63	49.713	MGP_CASTEiJ_G0024019	Hnrnpul2	67	50.992