EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0016547 (Gene tree)
Gene ID: -
Gene Symbol: Ascc3
Alias: ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 275171 bases
Position: chr10:49519543-49794713
Accession: 1925237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0024468	ResIII	PF04851.15	2.3e-26	1	2
MGP_CASTEiJ_P0024468	ResIII	PF04851.15	2.3e-26	2	2
MGP_CASTEiJ_P0024468	DEAD	PF00270.29	2.8e-53	1	2
MGP_CASTEiJ_P0024468	DEAD	PF00270.29	2.8e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0024467	-	1774	XM_006512923	MGP_CASTEiJ_P0024467	533 (aa)	XP_006512986	E9PZJ8
MGP_CASTEiJ_T0024468	-	7477	-	MGP_CASTEiJ_P0024468	2198 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0016547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0016547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0016547	Ascc3	80	46.541	MGP_CASTEiJ_G0025632	Snrnp200	86	42.051