EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0016635 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 35535 bases
Position: chr10:61698320-61733854
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0024770	GUCT	PF08152.12	4.9e-28	1	1
MGP_CASTEiJ_P0024770	ResIII	PF04851.15	5.5e-10	1	1
MGP_CASTEiJ_P0024770	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0024771	-	2716	-	MGP_CASTEiJ_P0024771	669 (aa)	-	-
MGP_CASTEiJ_T0024770	-	2530	XM_006514345	MGP_CASTEiJ_P0024770	735 (aa)	XP_006514408	Q99MJ9

Gene Model

Click here to download MGP_CASTEiJ_G0016635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0016635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0016635	Ddx50	54	33.962	MGP_CASTEiJ_G0021336	Ddx17	55	33.962
MGP_CASTEiJ_G0016635	Ddx50	55	32.345	MGP_CASTEiJ_G0018781	Eif4a3	86	32.345
MGP_CASTEiJ_G0016635	Ddx50	53	32.603	MGP_CASTEiJ_G0019865	Ddx41	57	32.603
MGP_CASTEiJ_G0016635	Ddx50	55	31.267	MGP_CASTEiJ_G0021938	Eif4a2	90	30.904
MGP_CASTEiJ_G0016635	Ddx50	61	34.279	MGP_CASTEiJ_G0026082	Ddx27	52	34.129
MGP_CASTEiJ_G0016635	Ddx50	95	64.043	MGP_CASTEiJ_G0016634	Ddx21	75	63.323
MGP_CASTEiJ_G0016635	Ddx50	53	33.799	MGP_CASTEiJ_G0034068	Ddx43	54	33.799
MGP_CASTEiJ_G0016635	Ddx50	61	30.676	MGP_CASTEiJ_G0030485	Ddx47	94	30.175
MGP_CASTEiJ_G0016635	Ddx50	54	31.383	MGP_CASTEiJ_G0016265	D1Pas1	56	32.181
MGP_CASTEiJ_G0016635	Ddx50	61	32.867	MGP_CASTEiJ_G0015762	Ddx18	57	34.351
MGP_CASTEiJ_G0016635	Ddx50	54	31.383	MGP_CASTEiJ_G0034550	Ddx3x	52	33.239