EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0016681 (Gene tree)
Gene ID: -
Gene Symbol: Rab36
Alias: 6330593L16Rik|AW047545
Full Name: RAB36%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 19408 bases
Position: chr10:74892770-74912177
Accession: 1924127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0025041	MMR_HSR1	PF01926.23	9.4e-06	1	1
MGP_CASTEiJ_P0025042	MMR_HSR1	PF01926.23	9.4e-06	1	1
MGP_CASTEiJ_P0025046	MMR_HSR1	PF01926.23	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0025040	-	953	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025041	-	3290	-	MGP_CASTEiJ_P0025041	267 (aa)	-	-
MGP_CASTEiJ_T0025042	-	2641	-	MGP_CASTEiJ_P0025042	267 (aa)	-	-
MGP_CASTEiJ_T0025043	-	2999	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025044	-	433	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025045	-	576	-	MGP_CASTEiJ_P0025045	134 (aa)	-	-
MGP_CASTEiJ_T0025046	-	2950	-	MGP_CASTEiJ_P0025046	267 (aa)	-	-
MGP_CASTEiJ_T0025047	-	772	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0016681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0016681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0016681	Rab36	64	37.427	MGP_CASTEiJ_G0024846	Rab14	77	40.171
MGP_CASTEiJ_G0016681	Rab36	60	35.625	MGP_CASTEiJ_G0018472	Rab5c	73	35.625
MGP_CASTEiJ_G0016681	Rab36	61	38.272	MGP_CASTEiJ_G0031541	Rab30	78	38.272
MGP_CASTEiJ_G0016681	Rab36	83	58.559	MGP_CASTEiJ_G0018075	Rab34	86	58.559
MGP_CASTEiJ_G0016681	Rab36	62	32.121	MGP_CASTEiJ_G0026136	Rab22a	84	32.121
MGP_CASTEiJ_G0016681	Rab36	79	35.780	MGP_CASTEiJ_G0033947	Rab11a	94	35.780
MGP_CASTEiJ_G0016681	Rab36	79	34.123	MGP_CASTEiJ_G0022763	Rab11b	94	34.123
MGP_CASTEiJ_G0016681	Rab36	62	34.940	MGP_CASTEiJ_G0034827	Rab39b	77	34.940
MGP_CASTEiJ_G0016681	Rab36	55	30.201	MGP_CASTEiJ_G0032241	Hras	83	30.625
MGP_CASTEiJ_G0016681	Rab36	79	33.649	MGP_CASTEiJ_G0023899	Rab1b	97	33.649
MGP_CASTEiJ_G0016681	Rab36	61	34.132	MGP_CASTEiJ_G0026366	Rab33b	54	37.903
MGP_CASTEiJ_G0016681	Rab36	63	37.500	MGP_CASTEiJ_G0027193	Rab2a	78	37.500
MGP_CASTEiJ_G0016681	Rab36	62	38.554	MGP_CASTEiJ_G0029079	Rab35	97	33.649
MGP_CASTEiJ_G0016681	Rab36	68	37.569	MGP_CASTEiJ_G0026561	Rab25	54	42.735
MGP_CASTEiJ_G0016681	Rab36	77	30.244	MGP_CASTEiJ_G0023094	Rab5a	91	30.244
MGP_CASTEiJ_G0016681	Rab36	69	38.172	MGP_CASTEiJ_G0015254	Rab23	77	38.172
MGP_CASTEiJ_G0016681	Rab36	60	33.750	MGP_CASTEiJ_G0023338	Rab18	56	38.793
MGP_CASTEiJ_G0016681	Rab36	61	36.196	MGP_CASTEiJ_G0018675	Rab37	74	36.196
MGP_CASTEiJ_G0016681	Rab36	80	36.620	MGP_CASTEiJ_G0034188	Rab6b	94	36.620
MGP_CASTEiJ_G0016681	Rab36	65	35.955	MGP_CASTEiJ_G0035073	Rab9b	50	42.000
MGP_CASTEiJ_G0016681	Rab36	60	35.000	MGP_CASTEiJ_G0017200	Rab5b	73	35.000
MGP_CASTEiJ_G0016681	Rab36	61	37.654	MGP_CASTEiJ_G0020554	Rab2b	79	38.710
MGP_CASTEiJ_G0016681	Rab36	63	36.571	MGP_CASTEiJ_G0030093	Rab7	91	45.833
MGP_CASTEiJ_G0016681	Rab36	79	33.175	MGP_CASTEiJ_G0017380	Rab1a	95	33.175
MGP_CASTEiJ_G0016681	Rab36	74	32.663	MGP_CASTEiJ_G0019160	Rab15	92	32.663
MGP_CASTEiJ_G0016681	Rab36	67	32.447	MGP_CASTEiJ_G0034658	Rab33a	51	36.885