EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0016721 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 213255 bases
Position: chr10:76771749-76985003
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0025173	KH_1	PF00013.29	3e-55	1	3
MGP_CASTEiJ_P0025173	KH_1	PF00013.29	3e-55	2	3
MGP_CASTEiJ_P0025173	KH_1	PF00013.29	3e-55	3	3
MGP_CASTEiJ_P0025170	KH_1	PF00013.29	3e-55	1	3
MGP_CASTEiJ_P0025170	KH_1	PF00013.29	3e-55	2	3
MGP_CASTEiJ_P0025170	KH_1	PF00013.29	3e-55	3	3
MGP_CASTEiJ_P0025172	KH_1	PF00013.29	3e-55	1	3
MGP_CASTEiJ_P0025172	KH_1	PF00013.29	3e-55	2	3
MGP_CASTEiJ_P0025172	KH_1	PF00013.29	3e-55	3	3
MGP_CASTEiJ_P0025175	KH_1	PF00013.29	7.9e-19	1	1
MGP_CASTEiJ_P0025173	KH_2	PF07650.17	4e-15	1	1
MGP_CASTEiJ_P0025170	KH_2	PF07650.17	4e-15	1	1
MGP_CASTEiJ_P0025172	KH_2	PF07650.17	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0025170	-	2013	XM_006513916	MGP_CASTEiJ_P0025170	371 (aa)	XP_006513979	P57722
MGP_CASTEiJ_T0025171	-	1736	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025172	-	1748	-	MGP_CASTEiJ_P0025172	371 (aa)	-	-
MGP_CASTEiJ_T0025173	-	2544	-	MGP_CASTEiJ_P0025173	370 (aa)	-	-
MGP_CASTEiJ_T0025174	-	1095	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025175	-	605	-	MGP_CASTEiJ_P0025175	160 (aa)	-	-
MGP_CASTEiJ_T0025176	-	1476	-	MGP_CASTEiJ_P0025176	394 (aa)	-	-
MGP_CASTEiJ_T0025177	-	944	-	MGP_CASTEiJ_P0025177	226 (aa)	-	-
MGP_CASTEiJ_T0025178	-	717	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025179	-	337	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0016721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0016721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0016721	Pcbp3	86	35.000	MGP_CASTEiJ_G0029819	Igf2bp3	59	33.813
MGP_CASTEiJ_G0016721	Pcbp3	99	65.873	MGP_CASTEiJ_G0030066	Pcbp1	99	68.033
MGP_CASTEiJ_G0016721	Pcbp3	85	69.811	MGP_CASTEiJ_G0034226	Pcbp4	93	70.652
MGP_CASTEiJ_G0016721	Pcbp3	85	31.973	MGP_CASTEiJ_G0024783	Fubp3	77	31.973
MGP_CASTEiJ_G0016721	Pcbp3	99	82.143	MGP_CASTEiJ_G0021674	Pcbp2	99	78.338
MGP_CASTEiJ_G0016721	Pcbp3	89	36.765	MGP_CASTEiJ_G0021927	Igf2bp2	62	33.333
MGP_CASTEiJ_G0016721	Pcbp3	79	41.667	MGP_CASTEiJ_G0019896	Hnrnpk	70	51.316
MGP_CASTEiJ_G0016721	Pcbp3	66	33.582	MGP_CASTEiJ_G0018302	Igf2bp1	60	33.333
MGP_CASTEiJ_G0016721	Pcbp3	72	40.351	MGP_CASTEiJ_G0019013	Nova1	59	40.351
MGP_CASTEiJ_G0016721	Pcbp3	66	31.250	MGP_CASTEiJ_G0027142	Fubp1	72	33.019