EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0016890 (Gene tree)
Gene ID: -
Gene Symbol: Celf5
Alias: 4930565A21Rik|Brunol5
Full Name: CUGBP%2C Elav-like family member 5
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 26380 bases
Position: chr10:81781283-81807662
Accession: 2442333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0025810	RRM_1	PF00076.22	1.5e-50	1	3
MGP_CASTEiJ_P0025810	RRM_1	PF00076.22	1.5e-50	2	3
MGP_CASTEiJ_P0025810	RRM_1	PF00076.22	1.5e-50	3	3
MGP_CASTEiJ_P0025814	RRM_1	PF00076.22	3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0025814	-	442	-	MGP_CASTEiJ_P0025814	92 (aa)	-	-
MGP_CASTEiJ_T0025813	-	748	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025812	-	945	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025811	-	606	-	-	- (aa)	-	-
MGP_CASTEiJ_T0025810	-	4404	XM_006513743	MGP_CASTEiJ_P0025810	446 (aa)	XP_006513806	D3Z4C5

Gene Model

Click here to download MGP_CASTEiJ_G0016890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0016890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0016890	Celf5	93	76.744	MGP_CASTEiJ_G0026707	Celf3	100	66.848
MGP_CASTEiJ_G0016890	Celf5	93	76.842	MGP_CASTEiJ_G0023416	Celf4	97	65.795
MGP_CASTEiJ_G0016890	Celf5	91	31.765	MGP_CASTEiJ_G0033478	Elavl3	77	38.272
MGP_CASTEiJ_G0016890	Celf5	66	34.426	MGP_CASTEiJ_G0035010	Pabpc5	70	35.955
MGP_CASTEiJ_G0016890	Celf5	93	56.322	MGP_CASTEiJ_G0025323	Celf1	98	44.650
MGP_CASTEiJ_G0016890	Celf5	78	36.250	MGP_CASTEiJ_G0017172	Rbms2	77	36.250
MGP_CASTEiJ_G0016890	Celf5	89	32.184	MGP_CASTEiJ_G0030063	Tia1	88	34.568
MGP_CASTEiJ_G0016890	Celf5	56	43.421	MGP_CASTEiJ_G0024960	Rbms1	54	41.379
MGP_CASTEiJ_G0016890	Celf5	93	80.645	MGP_CASTEiJ_G0033906	Celf6	75	84.783
MGP_CASTEiJ_G0016890	Celf5	97	30.857	MGP_CASTEiJ_G0027579	Elavl2	97	30.857
MGP_CASTEiJ_G0016890	Celf5	68	38.554	MGP_CASTEiJ_G0023577	Pabpc2	50	38.554
MGP_CASTEiJ_G0016890	Celf5	89	30.120	MGP_CASTEiJ_G0027708	Elavl4	74	37.500
MGP_CASTEiJ_G0016890	Celf5	57	42.105	MGP_CASTEiJ_G0034390	Rbms3	93	36.134
MGP_CASTEiJ_G0016890	Celf5	57	32.407	MGP_CASTEiJ_G0021232	Puf60	81	32.407
MGP_CASTEiJ_G0016890	Celf5	93	59.770	MGP_CASTEiJ_G0024528	Celf2	92	53.659
MGP_CASTEiJ_G0016890	Celf5	70	32.812	MGP_CASTEiJ_G0026012	Pabpc1l	60	35.870
MGP_CASTEiJ_G0016890	Celf5	86	33.333	MGP_CASTEiJ_G0029831	Hnrnpa2b1	64	35.616