EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0016961 (Gene tree)
Gene ID: -
Gene Symbol: Arl1
Alias: 2310008D22Rik|AU019749
Full Name: ADP-ribosylation factor-like 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 16593 bases
Position: chr10:89180349-89196941
Accession: 99436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0026102	MMR_HSR1	PF01926.23	0.00013	1	1
MGP_CASTEiJ_P0026103	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0026101	-	575	-	MGP_CASTEiJ_P0026101	52 (aa)	-	P61211
MGP_CASTEiJ_T0026102	-	2188	-	MGP_CASTEiJ_P0026102	183 (aa)	-	-
MGP_CASTEiJ_T0026103	-	564	-	MGP_CASTEiJ_P0026103	187 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0016961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0016961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0016961	Arl1	90	40.351	MGP_CASTEiJ_G0015639	Arl4c	84	41.358
MGP_CASTEiJ_G0016961	Arl1	93	31.395	MGP_CASTEiJ_G0015866	Arl8a	88	31.098
MGP_CASTEiJ_G0016961	Arl1	93	31.395	MGP_CASTEiJ_G0030189	Arl8b	88	30.488
MGP_CASTEiJ_G0016961	Arl1	94	44.186	MGP_CASTEiJ_G0018355	Arl5c	88	45.570
MGP_CASTEiJ_G0016961	Arl1	96	50.286	MGP_CASTEiJ_G0024562	Arl5b	93	51.572
MGP_CASTEiJ_G0016961	Arl1	85	39.241	MGP_CASTEiJ_G0026458	Arl14	83	38.994
MGP_CASTEiJ_G0016961	Arl1	90	47.561	MGP_CASTEiJ_G0024407	Arl3	90	47.561
MGP_CASTEiJ_G0016961	Arl1	97	34.921	MGP_CASTEiJ_G0026195	Arfrp1	85	36.416
MGP_CASTEiJ_G0016961	Arl1	89	37.805	MGP_CASTEiJ_G0020697	Arl11	93	37.805
MGP_CASTEiJ_G0016961	Arl1	61	35.433	MGP_CASTEiJ_G0026136	Rab22a	61	33.071
MGP_CASTEiJ_G0016961	Arl1	91	40.698	MGP_CASTEiJ_G0019000	Arl4a	81	40.123
MGP_CASTEiJ_G0016961	Arl1	92	42.262	MGP_CASTEiJ_G0023957	Arl2	91	42.262
MGP_CASTEiJ_G0016961	Arl1	93	36.313	MGP_CASTEiJ_G0022188	Arl6	91	36.471
MGP_CASTEiJ_G0016961	Arl1	94	59.302	MGP_CASTEiJ_G0029606	Arf5	87	60.510
MGP_CASTEiJ_G0016961	Arl1	97	56.742	MGP_CASTEiJ_G0021565	Arf3	90	58.282
MGP_CASTEiJ_G0016961	Arl1	60	36.036	MGP_CASTEiJ_G0019834	Arl10	53	36.036