EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0017083 (Gene tree)
Gene ID
-
Gene Symbol
Cpsf6
Alias
4733401N12Rik|AI256641|CFIM|CFIM68|HPBRII-4|HPBRII-7
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
34987 bases
Position
chr10:119458090-119493076
Accession
1913948
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0026506RRM_1PF00076.222.1e-0611
MGP_CASTEiJ_P0026511RRM_1PF00076.222.1e-0611
MGP_CASTEiJ_P0026507RRM_1PF00076.222.1e-0611
MGP_CASTEiJ_P0026508RRM_1PF00076.222.3e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0026513-2730--- (aa)--
MGP_CASTEiJ_T0026512-449-MGP_CASTEiJ_P002651238 (aa)--
MGP_CASTEiJ_T0026511-3825-MGP_CASTEiJ_P0026511551 (aa)--
MGP_CASTEiJ_T0026510-766-MGP_CASTEiJ_P0026510178 (aa)--
MGP_CASTEiJ_T0026506-6539XM_006513851MGP_CASTEiJ_P0026506551 (aa)XP_006513914Q6NVF9
MGP_CASTEiJ_T0026507-2200-MGP_CASTEiJ_P0026507552 (aa)--
MGP_CASTEiJ_T0026508-2227-MGP_CASTEiJ_P0026508588 (aa)--
MGP_CASTEiJ_T0026509-717-MGP_CASTEiJ_P0026509182 (aa)--
MGP_CASTEiJ_T0026514-377-MGP_CASTEiJ_P002651491 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0017083's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017083's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0017083Cpsf66555.385MGP_CASTEiJ_G0024054Cpsf77158.857

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