EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017200 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 23250 bases
Position: chr10:131731527-131754776
Accession: 105938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0026888	MMR_HSR1	PF01926.23	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0026888	-	3154	XM_006513384	MGP_CASTEiJ_P0026888	215 (aa)	XP_006513447	P61021

Gene Model

Click here to download MGP_CASTEiJ_G0017200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017200	Rab5b	90	35.323	MGP_CASTEiJ_G0035073	Rab9b	97	35.323
MGP_CASTEiJ_G0017200	Rab5b	75	47.205	MGP_CASTEiJ_G0033947	Rab11a	88	48.889
MGP_CASTEiJ_G0017200	Rab5b	75	45.963	MGP_CASTEiJ_G0026561	Rab25	76	45.963
MGP_CASTEiJ_G0017200	Rab5b	90	37.949	MGP_CASTEiJ_G0029079	Rab35	96	37.949
MGP_CASTEiJ_G0017200	Rab5b	91	37.949	MGP_CASTEiJ_G0027193	Rab2a	76	43.478
MGP_CASTEiJ_G0017200	Rab5b	97	86.124	MGP_CASTEiJ_G0018472	Rab5c	97	86.124
MGP_CASTEiJ_G0017200	Rab5b	77	32.335	MGP_CASTEiJ_G0030551	Kras	88	32.335
MGP_CASTEiJ_G0017200	Rab5b	78	35.882	MGP_CASTEiJ_G0034827	Rab39b	80	35.882
MGP_CASTEiJ_G0017200	Rab5b	100	81.860	MGP_CASTEiJ_G0023094	Rab5a	100	81.860
MGP_CASTEiJ_G0017200	Rab5b	73	35.000	MGP_CASTEiJ_G0016681	Rab36	60	35.000
MGP_CASTEiJ_G0017200	Rab5b	90	43.367	MGP_CASTEiJ_G0017380	Rab1a	95	43.367
MGP_CASTEiJ_G0017200	Rab5b	91	47.959	MGP_CASTEiJ_G0023184	Rab31	98	47.959
MGP_CASTEiJ_G0017200	Rab5b	83	37.705	MGP_CASTEiJ_G0034658	Rab33a	77	37.705
MGP_CASTEiJ_G0017200	Rab5b	85	35.326	MGP_CASTEiJ_G0023193	Rab12	63	35.326
MGP_CASTEiJ_G0017200	Rab5b	90	43.627	MGP_CASTEiJ_G0022763	Rab11b	94	43.627
MGP_CASTEiJ_G0017200	Rab5b	55	30.159	MGP_CASTEiJ_G0019000	Arl4a	60	30.159
MGP_CASTEiJ_G0017200	Rab5b	78	42.857	MGP_CASTEiJ_G0031541	Rab30	83	42.857
MGP_CASTEiJ_G0017200	Rab5b	93	35.294	MGP_CASTEiJ_G0035224	Rab9	99	35.294
MGP_CASTEiJ_G0017200	Rab5b	82	39.344	MGP_CASTEiJ_G0026366	Rab33b	79	39.130
MGP_CASTEiJ_G0017200	Rab5b	82	32.787	MGP_CASTEiJ_G0032241	Hras	96	32.787
MGP_CASTEiJ_G0017200	Rab5b	86	40.761	MGP_CASTEiJ_G0020554	Rab2b	85	40.761
MGP_CASTEiJ_G0017200	Rab5b	90	47.938	MGP_CASTEiJ_G0026136	Rab22a	98	47.938
MGP_CASTEiJ_G0017200	Rab5b	82	33.333	MGP_CASTEiJ_G0028465	Rheb	93	33.333
MGP_CASTEiJ_G0017200	Rab5b	82	36.932	MGP_CASTEiJ_G0019160	Rab15	83	36.932
MGP_CASTEiJ_G0017200	Rab5b	74	37.195	MGP_CASTEiJ_G0021498	Rabl2	72	37.195
MGP_CASTEiJ_G0017200	Rab5b	94	41.827	MGP_CASTEiJ_G0018675	Rab37	93	41.827
MGP_CASTEiJ_G0017200	Rab5b	77	45.783	MGP_CASTEiJ_G0034188	Rab6b	80	45.783
MGP_CASTEiJ_G0017200	Rab5b	84	30.220	MGP_CASTEiJ_G0026847	Nras	99	33.333
MGP_CASTEiJ_G0017200	Rab5b	78	42.442	MGP_CASTEiJ_G0030093	Rab7	90	49.296
MGP_CASTEiJ_G0017200	Rab5b	62	30.986	MGP_CASTEiJ_G0030189	Arl8b	73	30.986
MGP_CASTEiJ_G0017200	Rab5b	74	37.500	MGP_CASTEiJ_G0015254	Rab23	67	37.500
MGP_CASTEiJ_G0017200	Rab5b	82	45.198	MGP_CASTEiJ_G0023899	Rab1b	87	45.198
MGP_CASTEiJ_G0017200	Rab5b	62	30.986	MGP_CASTEiJ_G0015866	Arl8a	73	30.986
MGP_CASTEiJ_G0017200	Rab5b	90	38.462	MGP_CASTEiJ_G0023338	Rab18	93	38.462
MGP_CASTEiJ_G0017200	Rab5b	75	44.720	MGP_CASTEiJ_G0024846	Rab14	89	41.481