EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0017270 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 23568 bases
Position: chr11:94816-118383
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0027011	zf-C2H2	PF00096.26	4e-26	1	5
MGP_CASTEiJ_P0027011	zf-C2H2	PF00096.26	4e-26	2	5
MGP_CASTEiJ_P0027011	zf-C2H2	PF00096.26	4e-26	3	5
MGP_CASTEiJ_P0027011	zf-C2H2	PF00096.26	4e-26	4	5
MGP_CASTEiJ_P0027011	zf-C2H2	PF00096.26	4e-26	5	5
MGP_CASTEiJ_P0027012	zf-C2H2	PF00096.26	5.1e-20	1	4
MGP_CASTEiJ_P0027012	zf-C2H2	PF00096.26	5.1e-20	2	4
MGP_CASTEiJ_P0027012	zf-C2H2	PF00096.26	5.1e-20	3	4
MGP_CASTEiJ_P0027012	zf-C2H2	PF00096.26	5.1e-20	4	4
MGP_CASTEiJ_P0027013	zf-C2H2	PF00096.26	1.9e-16	1	3
MGP_CASTEiJ_P0027013	zf-C2H2	PF00096.26	1.9e-16	2	3
MGP_CASTEiJ_P0027013	zf-C2H2	PF00096.26	1.9e-16	3	3
MGP_CASTEiJ_P0027010	zf-C2H2	PF00096.26	2.3e-15	1	3
MGP_CASTEiJ_P0027010	zf-C2H2	PF00096.26	2.3e-15	2	3
MGP_CASTEiJ_P0027010	zf-C2H2	PF00096.26	2.3e-15	3	3
MGP_CASTEiJ_P0027011	zf-met	PF12874.7	3.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0027008	-	812	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027009	-	1903	-	MGP_CASTEiJ_P0027009	102 (aa)	-	-
MGP_CASTEiJ_T0027006	-	798	NR_045109	-	- (aa)	-	-
MGP_CASTEiJ_T0027007	-	1852	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027015	-	1249	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027014	-	1933	-	MGP_CASTEiJ_P0027014	583 (aa)	-	-
MGP_CASTEiJ_T0027017	-	652	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027016	-	456	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027011	-	3697	-	MGP_CASTEiJ_P0027011	687 (aa)	-	-
MGP_CASTEiJ_T0027010	-	2926	-	MGP_CASTEiJ_P0027010	537 (aa)	-	-
MGP_CASTEiJ_T0027013	-	3172	-	MGP_CASTEiJ_P0027013	537 (aa)	-	-
MGP_CASTEiJ_T0027012	-	3117	-	MGP_CASTEiJ_P0027012	641 (aa)	-	-
MGP_CASTEiJ_T0027018	-	495	-	MGP_CASTEiJ_P0027018	70 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017270	Patz1	97	30.769	MGP_CASTEiJ_G0026290	Mynn	86	30.556