EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017380 (Gene tree)
Gene ID: -
Gene Symbol: Rab1a
Alias: ECO:0000313|MGI:MGI:97842},GN Rab1A|Gtbp|Rab-1|Rab1|Rab1 {ECO:0000313|EMBL:EDL07829.1,GN ECO:0000313|Ensembl:ENSMUSP00000127330|Ypt1|mKIAA3012|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 25816 bases
Position: chr11:17584164-17609979
Accession: 97842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0027524	MMR_HSR1	PF01926.23	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0027525	-	710	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027524	-	970	-	MGP_CASTEiJ_P0027524	205 (aa)	-	-
MGP_CASTEiJ_T0027523	-	955	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0017380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017380	Rab1a	95	38.660	MGP_CASTEiJ_G0026136	Rab22a	97	38.660
MGP_CASTEiJ_G0017380	Rab1a	57	33.058	MGP_CASTEiJ_G0023957	Arl2	61	33.058
MGP_CASTEiJ_G0017380	Rab1a	58	34.454	MGP_CASTEiJ_G0015866	Arl8a	62	34.454
MGP_CASTEiJ_G0017380	Rab1a	94	45.361	MGP_CASTEiJ_G0023338	Rab18	93	45.361
MGP_CASTEiJ_G0017380	Rab1a	100	45.581	MGP_CASTEiJ_G0022763	Rab11b	99	45.581
MGP_CASTEiJ_G0017380	Rab1a	83	43.429	MGP_CASTEiJ_G0026366	Rab33b	76	43.429
MGP_CASTEiJ_G0017380	Rab1a	86	43.820	MGP_CASTEiJ_G0034827	Rab39b	84	43.820
MGP_CASTEiJ_G0017380	Rab1a	97	46.465	MGP_CASTEiJ_G0020554	Rab2b	92	46.465
MGP_CASTEiJ_G0017380	Rab1a	80	38.415	MGP_CASTEiJ_G0026847	Nras	96	39.041
MGP_CASTEiJ_G0017380	Rab1a	57	32.203	MGP_CASTEiJ_G0030189	Arl8b	61	32.203
MGP_CASTEiJ_G0017380	Rab1a	82	50.296	MGP_CASTEiJ_G0023193	Rab12	58	50.296
MGP_CASTEiJ_G0017380	Rab1a	80	36.527	MGP_CASTEiJ_G0034164	Mras	80	36.527
MGP_CASTEiJ_G0017380	Rab1a	75	37.580	MGP_CASTEiJ_G0021498	Rabl2	67	37.580
MGP_CASTEiJ_G0017380	Rab1a	81	34.337	MGP_CASTEiJ_G0015254	Rab23	70	34.337
MGP_CASTEiJ_G0017380	Rab1a	99	53.960	MGP_CASTEiJ_G0029079	Rab35	100	53.960
MGP_CASTEiJ_G0017380	Rab1a	81	50.602	MGP_CASTEiJ_G0031541	Rab30	82	50.602
MGP_CASTEiJ_G0017380	Rab1a	99	92.079	MGP_CASTEiJ_G0023899	Rab1b	100	92.079
MGP_CASTEiJ_G0017380	Rab1a	95	33.175	MGP_CASTEiJ_G0016681	Rab36	79	33.175
MGP_CASTEiJ_G0017380	Rab1a	90	39.785	MGP_CASTEiJ_G0023184	Rab31	95	39.785
MGP_CASTEiJ_G0017380	Rab1a	94	43.434	MGP_CASTEiJ_G0034658	Rab33a	83	43.434
MGP_CASTEiJ_G0017380	Rab1a	95	43.590	MGP_CASTEiJ_G0018472	Rab5c	89	43.590
MGP_CASTEiJ_G0017380	Rab1a	85	52.299	MGP_CASTEiJ_G0033947	Rab11a	100	50.000
MGP_CASTEiJ_G0017380	Rab1a	77	40.491	MGP_CASTEiJ_G0018075	Rab34	62	40.491
MGP_CASTEiJ_G0017380	Rab1a	57	31.092	MGP_CASTEiJ_G0015639	Arl4c	61	31.092
MGP_CASTEiJ_G0017380	Rab1a	78	39.264	MGP_CASTEiJ_G0030093	Rab7	100	39.241
MGP_CASTEiJ_G0017380	Rab1a	76	38.994	MGP_CASTEiJ_G0035224	Rab9	79	38.994
MGP_CASTEiJ_G0017380	Rab1a	84	35.028	MGP_CASTEiJ_G0032241	Hras	93	35.028
MGP_CASTEiJ_G0017380	Rab1a	76	38.994	MGP_CASTEiJ_G0035073	Rab9b	79	38.994
MGP_CASTEiJ_G0017380	Rab1a	68	30.496	MGP_CASTEiJ_G0024407	Arl3	72	30.496
MGP_CASTEiJ_G0017380	Rab1a	94	36.410	MGP_CASTEiJ_G0034188	Rab6b	94	36.410
MGP_CASTEiJ_G0017380	Rab1a	99	44.554	MGP_CASTEiJ_G0024846	Rab14	97	47.619
MGP_CASTEiJ_G0017380	Rab1a	82	32.544	MGP_CASTEiJ_G0028465	Rheb	91	32.544
MGP_CASTEiJ_G0017380	Rab1a	80	38.415	MGP_CASTEiJ_G0030551	Kras	97	35.676
MGP_CASTEiJ_G0017380	Rab1a	95	43.814	MGP_CASTEiJ_G0023094	Rab5a	90	43.814
MGP_CASTEiJ_G0017380	Rab1a	62	30.303	MGP_CASTEiJ_G0026458	Arl14	65	30.303
MGP_CASTEiJ_G0017380	Rab1a	82	45.833	MGP_CASTEiJ_G0026561	Rab25	79	45.833
MGP_CASTEiJ_G0017380	Rab1a	90	48.108	MGP_CASTEiJ_G0027193	Rab2a	99	45.238
MGP_CASTEiJ_G0017380	Rab1a	80	50.909	MGP_CASTEiJ_G0019160	Rab15	78	50.909
MGP_CASTEiJ_G0017380	Rab1a	57	31.933	MGP_CASTEiJ_G0019000	Arl4a	59	31.933
MGP_CASTEiJ_G0017380	Rab1a	95	43.367	MGP_CASTEiJ_G0017200	Rab5b	90	43.367
MGP_CASTEiJ_G0017380	Rab1a	81	45.238	MGP_CASTEiJ_G0018675	Rab37	78	45.238