EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017460 (Gene tree)
Gene ID: -
Gene Symbol: Npm1
Alias: B23|NO38|Npm|nucleolar protein NO38
Full Name: nucleophosmin 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 10960 bases
Position: chr11:31194534-31205493
Accession: 106184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0027898	Nucleoplasmin	PF03066.15	1.8e-42	1	1
MGP_CASTEiJ_P0027896	Nucleoplasmin	PF03066.15	2e-42	1	1
MGP_CASTEiJ_P0027899	Nucleoplasmin	PF03066.15	2.3e-42	1	1
MGP_CASTEiJ_P0027895	Nucleoplasmin	PF03066.15	2.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0027895	-	1639	-	MGP_CASTEiJ_P0027895	292 (aa)	-	Q61937
MGP_CASTEiJ_T0027897	-	828	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027896	-	1195	-	MGP_CASTEiJ_P0027896	264 (aa)	-	-
MGP_CASTEiJ_T0027900	-	440	-	-	- (aa)	-	-
MGP_CASTEiJ_T0027899	-	966	-	MGP_CASTEiJ_P0027899	285 (aa)	-	-
MGP_CASTEiJ_T0027898	-	1200	-	MGP_CASTEiJ_P0027898	257 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017460	Npm1	88	92.511	MGP_CASTEiJ_G0023419	Gm5611	98	92.857