EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017524 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 11818 bases
Position: chr11:47589295-47601112
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028133	MMR_HSR1	PF01926.23	5.8e-05	1	1
MGP_CASTEiJ_P0028132	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028133	-	1225	-	MGP_CASTEiJ_P0028133	288 (aa)	-	-
MGP_CASTEiJ_T0028132	-	2258	-	MGP_CASTEiJ_P0028132	409 (aa)	-	-
MGP_CASTEiJ_T0028131	-	3864	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0017524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017524	Irgm1	83	59.664	MGP_CASTEiJ_G0017663	Irgm2	92	48.787
MGP_CASTEiJ_G0017524	Irgm1	89	56.420	MGP_CASTEiJ_G0017662	Igtp	90	50.260
MGP_CASTEiJ_G0017524	Irgm1	84	37.247	MGP_CASTEiJ_G0023666	-	60	37.247
MGP_CASTEiJ_G0017524	Irgm1	86	34.510	MGP_CASTEiJ_G0023667	Gm4841	90	31.635
MGP_CASTEiJ_G0017524	Irgm1	79	36.864	MGP_CASTEiJ_G0023665	Gm4951	77	33.127
MGP_CASTEiJ_G0017524	Irgm1	76	35.169	MGP_CASTEiJ_G0030874	Irgc1	71	30.183
MGP_CASTEiJ_G0017524	Irgm1	82	40.164	MGP_CASTEiJ_G0017529	-	76	45.455
MGP_CASTEiJ_G0017524	Irgm1	83	43.269	MGP_CASTEiJ_G0017526	-	75	43.269
MGP_CASTEiJ_G0017524	Irgm1	83	40.000	MGP_CASTEiJ_G0017527	9930111J21Rik2	66	37.049
MGP_CASTEiJ_G0017524	Irgm1	83	43.269	MGP_CASTEiJ_G0017525	-	75	43.269
MGP_CASTEiJ_G0017524	Irgm1	65	43.919	MGP_CASTEiJ_G0017531	-	72	43.919
MGP_CASTEiJ_G0017524	Irgm1	82	40.164	MGP_CASTEiJ_G0017530	-	72	36.667
MGP_CASTEiJ_G0017524	Irgm1	89	32.199	MGP_CASTEiJ_G0017532	Ifi47	91	32.199