EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 16161 bases
Position: chr11:47621386-47637546
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028135	MMR_HSR1	PF01926.23	5.8e-19	1	2
MGP_CASTEiJ_P0028135	MMR_HSR1	PF01926.23	5.8e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028135	-	3052	-	MGP_CASTEiJ_P0028135	614 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0017526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017526	-	72	43.966	MGP_CASTEiJ_G0030874	Irgc1	71	43.966
MGP_CASTEiJ_G0017526	-	75	43.269	MGP_CASTEiJ_G0017524	Irgm1	83	43.269
MGP_CASTEiJ_G0017526	-	100	100.000	MGP_CASTEiJ_G0017525	-	100	100.000
MGP_CASTEiJ_G0017526	-	91	73.228	MGP_CASTEiJ_G0017529	-	98	72.800
MGP_CASTEiJ_G0017526	-	88	50.345	MGP_CASTEiJ_G0023665	Gm4951	99	50.345
MGP_CASTEiJ_G0017526	-	59	63.063	MGP_CASTEiJ_G0023666	-	66	58.955
MGP_CASTEiJ_G0017526	-	79	49.153	MGP_CASTEiJ_G0017532	Ifi47	91	49.153
MGP_CASTEiJ_G0017526	-	76	71.795	MGP_CASTEiJ_G0017531	-	96	71.795
MGP_CASTEiJ_G0017526	-	91	73.228	MGP_CASTEiJ_G0017530	-	96	73.228
MGP_CASTEiJ_G0017526	-	68	40.678	MGP_CASTEiJ_G0017663	Irgm2	73	40.678
MGP_CASTEiJ_G0017526	-	66	41.441	MGP_CASTEiJ_G0017662	Igtp	67	41.593
MGP_CASTEiJ_G0017526	-	94	56.818	MGP_CASTEiJ_G0023667	Gm4841	100	54.887
MGP_CASTEiJ_G0017526	-	88	100.000	MGP_CASTEiJ_G0017527	9930111J21Rik2	86	100.000