EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017527 (Gene tree)
Gene ID: -
Gene Symbol: 9930111J21Rik2
Alias: 9930111J21Rik|Irgb5|OTTMUSG00000005540
Full Name: RIKEN cDNA 9930111J21 gene 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 8139 bases
Position: chr11:47629476-47637614
Accession: 3711310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028136	MMR_HSR1	PF01926.23	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028136	-	2497	-	MGP_CASTEiJ_P0028136	462 (aa)	-	Q5SVN9

Gene Model

Click here to download MGP_CASTEiJ_G0017527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017527	9930111J21Rik2	86	100.000	MGP_CASTEiJ_G0017526	-	88	100.000
MGP_CASTEiJ_G0017527	9930111J21Rik2	86	100.000	MGP_CASTEiJ_G0017525	-	88	100.000
MGP_CASTEiJ_G0017527	9930111J21Rik2	66	37.049	MGP_CASTEiJ_G0017524	Irgm1	83	40.000
MGP_CASTEiJ_G0017527	9930111J21Rik2	82	53.077	MGP_CASTEiJ_G0017529	-	98	56.154
MGP_CASTEiJ_G0017527	9930111J21Rik2	71	36.970	MGP_CASTEiJ_G0030874	Irgc1	71	36.970
MGP_CASTEiJ_G0017527	9930111J21Rik2	64	31.987	MGP_CASTEiJ_G0017662	Igtp	67	32.667
MGP_CASTEiJ_G0017527	9930111J21Rik2	65	32.781	MGP_CASTEiJ_G0017663	Irgm2	72	32.890
MGP_CASTEiJ_G0017527	9930111J21Rik2	87	44.417	MGP_CASTEiJ_G0023667	Gm4841	99	44.417
MGP_CASTEiJ_G0017527	9930111J21Rik2	54	51.406	MGP_CASTEiJ_G0023666	-	65	49.071
MGP_CASTEiJ_G0017527	9930111J21Rik2	85	40.436	MGP_CASTEiJ_G0023665	Gm4951	98	40.436
MGP_CASTEiJ_G0017527	9930111J21Rik2	82	53.077	MGP_CASTEiJ_G0017530	-	94	53.077
MGP_CASTEiJ_G0017527	9930111J21Rik2	51	71.795	MGP_CASTEiJ_G0017531	-	83	71.795
MGP_CASTEiJ_G0017527	9930111J21Rik2	78	40.957	MGP_CASTEiJ_G0017532	Ifi47	89	41.379