EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017529 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 10460 bases
Position: chr11:47751163-47761622
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028141	MMR_HSR1	PF01926.23	2.4e-07	1	1
MGP_CASTEiJ_P0028140	MMR_HSR1	PF01926.23	6.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028140	-	636	-	MGP_CASTEiJ_P0028140	131 (aa)	-	-
MGP_CASTEiJ_T0028141	-	3024	-	MGP_CASTEiJ_P0028141	414 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0017529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017529	-	91	43.122	MGP_CASTEiJ_G0017532	Ifi47	90	43.122
MGP_CASTEiJ_G0017529	-	100	100.000	MGP_CASTEiJ_G0017530	-	100	100.000
MGP_CASTEiJ_G0017529	-	90	71.304	MGP_CASTEiJ_G0017531	-	89	73.099
MGP_CASTEiJ_G0017529	-	98	72.800	MGP_CASTEiJ_G0017525	-	91	73.228
MGP_CASTEiJ_G0017529	-	76	45.455	MGP_CASTEiJ_G0017524	Irgm1	82	40.164
MGP_CASTEiJ_G0017529	-	98	56.154	MGP_CASTEiJ_G0017527	9930111J21Rik2	82	53.077
MGP_CASTEiJ_G0017529	-	98	49.219	MGP_CASTEiJ_G0023665	Gm4951	96	43.532
MGP_CASTEiJ_G0017529	-	96	55.556	MGP_CASTEiJ_G0023667	Gm4841	94	49.742
MGP_CASTEiJ_G0017529	-	80	60.000	MGP_CASTEiJ_G0023666	-	68	55.036
MGP_CASTEiJ_G0017529	-	79	43.269	MGP_CASTEiJ_G0017662	Igtp	66	34.130
MGP_CASTEiJ_G0017529	-	85	31.818	MGP_CASTEiJ_G0017663	Irgm2	93	31.525
MGP_CASTEiJ_G0017529	-	98	72.800	MGP_CASTEiJ_G0017526	-	91	73.228
MGP_CASTEiJ_G0017529	-	85	44.643	MGP_CASTEiJ_G0030874	Irgc1	82	35.248