EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017530 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 6846 bases
Position: chr11:47754777-47761622
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028142	MMR_HSR1	PF01926.23	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028142	-	3012	-	MGP_CASTEiJ_P0028142	414 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0017530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017530	-	70	34.130	MGP_CASTEiJ_G0017662	Igtp	66	34.130
MGP_CASTEiJ_G0017530	-	85	31.818	MGP_CASTEiJ_G0017663	Irgm2	93	31.525
MGP_CASTEiJ_G0017530	-	89	35.248	MGP_CASTEiJ_G0030874	Irgc1	82	35.248
MGP_CASTEiJ_G0017530	-	93	49.742	MGP_CASTEiJ_G0023667	Gm4841	94	49.742
MGP_CASTEiJ_G0017530	-	62	57.255	MGP_CASTEiJ_G0023666	-	68	55.036
MGP_CASTEiJ_G0017530	-	95	42.893	MGP_CASTEiJ_G0023665	Gm4951	96	43.532
MGP_CASTEiJ_G0017530	-	80	61.951	MGP_CASTEiJ_G0017531	-	89	73.099
MGP_CASTEiJ_G0017530	-	91	43.122	MGP_CASTEiJ_G0017532	Ifi47	90	43.122
MGP_CASTEiJ_G0017530	-	100	100.000	MGP_CASTEiJ_G0017529	-	100	100.000
MGP_CASTEiJ_G0017530	-	94	53.077	MGP_CASTEiJ_G0017527	9930111J21Rik2	82	53.077
MGP_CASTEiJ_G0017530	-	96	73.228	MGP_CASTEiJ_G0017526	-	91	73.228
MGP_CASTEiJ_G0017530	-	96	73.228	MGP_CASTEiJ_G0017525	-	91	73.228
MGP_CASTEiJ_G0017530	-	72	36.667	MGP_CASTEiJ_G0017524	Irgm1	82	40.164