EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0017562 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnph1
Alias: AI642080|E430005G16Rik|Hnrnph|Hnrph|Hnrph1|Hnrph1 {ECO:0000313|EMBL:AAH42187.2,GN ECO:0000313|MGI:MGI:1891925}
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 11095 bases
Position: chr11:49150798-49161892
Accession: 1891925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028263	zf-RNPHF	PF08080.12	1.5e-22	1	1
MGP_CASTEiJ_P0028263	RRM_1	PF00076.22	2.6e-32	1	3
MGP_CASTEiJ_P0028263	RRM_1	PF00076.22	2.6e-32	2	3
MGP_CASTEiJ_P0028263	RRM_1	PF00076.22	2.6e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028267	-	1698	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028266	-	582	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028265	-	860	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028264	-	1116	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028263	-	1750	-	MGP_CASTEiJ_P0028263	472 (aa)	-	-
MGP_CASTEiJ_T0028262	-	3975	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028261	-	870	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028260	-	581	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028258	-	1572	-	MGP_CASTEiJ_P0028258	439 (aa)	-	-
MGP_CASTEiJ_T0028259	-	4198	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028269	-	582	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028268	-	837	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028271	-	159	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028270	-	163	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028257	-	1634	XM_006533875	MGP_CASTEiJ_P0028257	449 (aa)	XP_006533938	O35737

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017562	Hnrnph1	100	95.323	MGP_CASTEiJ_G0026216	Hnrnph2	100	95.323
MGP_CASTEiJ_G0017562	Hnrnph1	92	59.878	MGP_CASTEiJ_G0016642	Hnrnph3	90	68.683
MGP_CASTEiJ_G0017562	Hnrnph1	61	65.333	MGP_CASTEiJ_G0028820	Grsf1	92	65.333