EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017568 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 19778 bases
Position: chr11:49678603-49698380
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	1	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	2	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	3	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	4	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	5	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	6	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	7	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	8	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	9	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	10	11
MGP_CASTEiJ_P0028298	zf-C2H2	PF00096.26	3.1e-64	11	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	1	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	2	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	3	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	4	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	5	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	6	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	7	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	8	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	9	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	10	11
MGP_CASTEiJ_P0028296	zf-C2H2	PF00096.26	7.9e-63	11	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	1	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	2	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	3	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	4	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	5	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	6	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	7	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	8	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	9	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	10	11
MGP_CASTEiJ_P0028297	zf-C2H2	PF00096.26	7.9e-63	11	11
MGP_CASTEiJ_P0028296	zf-met	PF12874.7	0.00061	1	1
MGP_CASTEiJ_P0028297	zf-met	PF12874.7	0.00061	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028298	-	1957	-	MGP_CASTEiJ_P0028298	425 (aa)	-	-
MGP_CASTEiJ_T0028299	-	579	-	-	- (aa)	-	-
MGP_CASTEiJ_T0028296	-	2059	-	MGP_CASTEiJ_P0028296	536 (aa)	-	-
MGP_CASTEiJ_T0028297	-	2090	-	MGP_CASTEiJ_P0028297	536 (aa)	-	-
MGP_CASTEiJ_T0028294	-	918	XM_006533208	MGP_CASTEiJ_P0028294	177 (aa)	XP_006533271	Q5NCH5
MGP_CASTEiJ_T0028295	-	915	-	MGP_CASTEiJ_P0028295	176 (aa)	-	-
MGP_CASTEiJ_T0028300	-	722	-	MGP_CASTEiJ_P0028300	122 (aa)	-	-
MGP_CASTEiJ_T0028301	-	606	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0017568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017568	Zfp454	98	48.415	MGP_CASTEiJ_G0019982	Zfp748	100	49.057
MGP_CASTEiJ_G0017568	Zfp454	88	54.248	MGP_CASTEiJ_G0019986	-	95	52.676
MGP_CASTEiJ_G0017568	Zfp454	98	51.136	MGP_CASTEiJ_G0033422	Zfp26	89	51.136
MGP_CASTEiJ_G0017568	Zfp454	87	37.600	MGP_CASTEiJ_G0033000	Zfp319	91	37.989
MGP_CASTEiJ_G0017568	Zfp454	96	47.879	MGP_CASTEiJ_G0017709	-	93	47.879
MGP_CASTEiJ_G0017568	Zfp454	98	52.159	MGP_CASTEiJ_G0033485	Zfp872	99	51.976
MGP_CASTEiJ_G0017568	Zfp454	83	49.451	MGP_CASTEiJ_G0030635	Zfp628	60	49.451
MGP_CASTEiJ_G0017568	Zfp454	98	63.830	MGP_CASTEiJ_G0019990	Zfp493	76	63.830
MGP_CASTEiJ_G0017568	Zfp454	87	46.324	MGP_CASTEiJ_G0031153	Zfp715	61	57.778
MGP_CASTEiJ_G0017568	Zfp454	100	55.405	MGP_CASTEiJ_G0025643	Zfp661	98	55.405
MGP_CASTEiJ_G0017568	Zfp454	99	46.092	MGP_CASTEiJ_G0022483	Zfp945	99	46.761
MGP_CASTEiJ_G0017568	Zfp454	85	42.262	MGP_CASTEiJ_G0028956	Gfi1	100	45.794
MGP_CASTEiJ_G0017568	Zfp454	98	53.226	MGP_CASTEiJ_G0030868	Zfp61	62	55.556
MGP_CASTEiJ_G0017568	Zfp454	98	49.292	MGP_CASTEiJ_G0030861	Zfp112	72	57.143
MGP_CASTEiJ_G0017568	Zfp454	98	47.399	MGP_CASTEiJ_G0030866	Zfp108	99	47.709
MGP_CASTEiJ_G0017568	Zfp454	84	50.202	MGP_CASTEiJ_G0030867	Zfp93	71	50.202
MGP_CASTEiJ_G0017568	Zfp454	85	36.486	MGP_CASTEiJ_G0030643	Zfp865	80	36.486
MGP_CASTEiJ_G0017568	Zfp454	94	55.208	MGP_CASTEiJ_G0030265	Zfp637	95	55.208
MGP_CASTEiJ_G0017568	Zfp454	98	43.782	MGP_CASTEiJ_G0026068	Zfp334	99	43.939
MGP_CASTEiJ_G0017568	Zfp454	92	49.528	MGP_CASTEiJ_G0030966	Zfp59	99	49.528
MGP_CASTEiJ_G0017568	Zfp454	86	51.095	MGP_CASTEiJ_G0032059	Zfp768	51	50.523
MGP_CASTEiJ_G0017568	Zfp454	92	52.000	MGP_CASTEiJ_G0019962	Rslcan18	71	52.000
MGP_CASTEiJ_G0017568	Zfp454	98	47.953	MGP_CASTEiJ_G0019963	Zfp759	100	47.953
MGP_CASTEiJ_G0017568	Zfp454	86	36.599	MGP_CASTEiJ_G0029798	Repin1	92	35.635
MGP_CASTEiJ_G0017568	Zfp454	95	42.697	MGP_CASTEiJ_G0023809	Zfp236	64	45.283
MGP_CASTEiJ_G0017568	Zfp454	100	45.885	MGP_CASTEiJ_G0022467	Zfp51	95	60.714
MGP_CASTEiJ_G0017568	Zfp454	99	50.000	MGP_CASTEiJ_G0022465	Zfp677	99	50.000
MGP_CASTEiJ_G0017568	Zfp454	99	43.774	MGP_CASTEiJ_G0032062	-	89	45.385
MGP_CASTEiJ_G0017568	Zfp454	99	43.774	MGP_CASTEiJ_G0032063	-	89	45.385
MGP_CASTEiJ_G0017568	Zfp454	99	43.774	MGP_CASTEiJ_G0032061	-	89	45.385
MGP_CASTEiJ_G0017568	Zfp454	88	35.714	MGP_CASTEiJ_G0030898	Zfp574	88	37.500
MGP_CASTEiJ_G0017568	Zfp454	83	39.130	MGP_CASTEiJ_G0017666	Zfp672	90	42.029
MGP_CASTEiJ_G0017568	Zfp454	98	48.828	MGP_CASTEiJ_G0033155	Zfp1	99	48.828
MGP_CASTEiJ_G0017568	Zfp454	88	42.090	MGP_CASTEiJ_G0022489	Zscan10	79	44.554
MGP_CASTEiJ_G0017568	Zfp454	86	38.571	MGP_CASTEiJ_G0029924	Prdm5	78	38.571
MGP_CASTEiJ_G0017568	Zfp454	87	58.310	MGP_CASTEiJ_G0031027	Zfp420	98	59.532
MGP_CASTEiJ_G0017568	Zfp454	98	50.523	MGP_CASTEiJ_G0030869	Zfp94	97	50.523
MGP_CASTEiJ_G0017568	Zfp454	86	42.424	MGP_CASTEiJ_G0028178	Zbtb17	55	43.322
MGP_CASTEiJ_G0017568	Zfp454	86	45.745	MGP_CASTEiJ_G0026106	Zfp64	73	38.571
MGP_CASTEiJ_G0017568	Zfp454	86	47.951	MGP_CASTEiJ_G0019561	Zkscan4	51	49.569
MGP_CASTEiJ_G0017568	Zfp454	95	35.514	MGP_CASTEiJ_G0030646	Zfp784	92	33.040
MGP_CASTEiJ_G0017568	Zfp454	81	47.423	MGP_CASTEiJ_G0028615	Zbtb49	63	50.000
MGP_CASTEiJ_G0017568	Zfp454	99	46.455	MGP_CASTEiJ_G0021271	Zfp251	95	47.396
MGP_CASTEiJ_G0017568	Zfp454	93	46.113	MGP_CASTEiJ_G0032779	Zfp882	99	43.860
MGP_CASTEiJ_G0017568	Zfp454	98	47.945	MGP_CASTEiJ_G0032778	Zfp709	99	47.945