EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0017709 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 11334 bases
Position: chr11:58949177-58960510
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	1	8
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	2	8
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	3	8
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	4	8
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	5	8
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	6	8
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	7	8
MGP_CASTEiJ_P0028787	zf-C2H2	PF00096.26	1.2e-36	8	8
MGP_CASTEiJ_P0028787	zf-C2H2_jaz	PF12171.8	5.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0028787	-	3424	-	MGP_CASTEiJ_P0028787	473 (aa)	-	-
MGP_CASTEiJ_T0028788	-	454	-	MGP_CASTEiJ_P0028788	119 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0017709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0017709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0017709	-	92	49.735	MGP_CASTEiJ_G0030265	Zfp637	95	49.735
MGP_CASTEiJ_G0017709	-	82	50.000	MGP_CASTEiJ_G0030635	Zfp628	60	50.000
MGP_CASTEiJ_G0017709	-	83	39.091	MGP_CASTEiJ_G0026106	Zfp64	73	32.376
MGP_CASTEiJ_G0017709	-	82	51.882	MGP_CASTEiJ_G0031027	Zfp420	98	51.882
MGP_CASTEiJ_G0017709	-	95	42.478	MGP_CASTEiJ_G0032061	-	90	42.478
MGP_CASTEiJ_G0017709	-	95	42.478	MGP_CASTEiJ_G0032063	-	90	42.478
MGP_CASTEiJ_G0017709	-	95	42.478	MGP_CASTEiJ_G0032062	-	90	42.478
MGP_CASTEiJ_G0017709	-	95	65.957	MGP_CASTEiJ_G0019990	Zfp493	74	65.957
MGP_CASTEiJ_G0017709	-	94	36.545	MGP_CASTEiJ_G0029924	Prdm5	84	36.545
MGP_CASTEiJ_G0017709	-	96	50.943	MGP_CASTEiJ_G0033422	Zfp26	96	50.943
MGP_CASTEiJ_G0017709	-	79	43.023	MGP_CASTEiJ_G0028956	Gfi1	100	45.238
MGP_CASTEiJ_G0017709	-	94	44.262	MGP_CASTEiJ_G0023809	Zfp236	71	40.157
MGP_CASTEiJ_G0017709	-	96	45.600	MGP_CASTEiJ_G0019963	Zfp759	99	45.600
MGP_CASTEiJ_G0017709	-	88	47.797	MGP_CASTEiJ_G0030869	Zfp94	98	40.541
MGP_CASTEiJ_G0017709	-	95	53.378	MGP_CASTEiJ_G0033485	Zfp872	100	51.852
MGP_CASTEiJ_G0017709	-	95	46.467	MGP_CASTEiJ_G0019982	Zfp748	99	46.467
MGP_CASTEiJ_G0017709	-	89	49.852	MGP_CASTEiJ_G0019986	-	95	49.462
MGP_CASTEiJ_G0017709	-	77	45.217	MGP_CASTEiJ_G0019561	Zkscan4	53	44.545
MGP_CASTEiJ_G0017709	-	96	50.000	MGP_CASTEiJ_G0030868	Zfp61	99	50.000
MGP_CASTEiJ_G0017709	-	88	47.403	MGP_CASTEiJ_G0030867	Zfp93	77	47.403
MGP_CASTEiJ_G0017709	-	86	47.368	MGP_CASTEiJ_G0030866	Zfp108	73	45.995
MGP_CASTEiJ_G0017709	-	81	50.000	MGP_CASTEiJ_G0030861	Zfp112	62	50.000
MGP_CASTEiJ_G0017709	-	95	46.398	MGP_CASTEiJ_G0031153	Zfp715	64	60.000
MGP_CASTEiJ_G0017709	-	93	47.879	MGP_CASTEiJ_G0017568	Zfp454	96	47.879
MGP_CASTEiJ_G0017709	-	81	36.480	MGP_CASTEiJ_G0030898	Zfp574	73	37.245
MGP_CASTEiJ_G0017709	-	89	35.917	MGP_CASTEiJ_G0033000	Zfp319	91	36.364
MGP_CASTEiJ_G0017709	-	98	42.742	MGP_CASTEiJ_G0022483	Zfp945	99	42.742
MGP_CASTEiJ_G0017709	-	82	37.160	MGP_CASTEiJ_G0022489	Zscan10	80	37.160
MGP_CASTEiJ_G0017709	-	79	47.036	MGP_CASTEiJ_G0032059	Zfp768	57	46.316
MGP_CASTEiJ_G0017709	-	88	49.843	MGP_CASTEiJ_G0021271	Zfp251	74	47.945
MGP_CASTEiJ_G0017709	-	79	41.975	MGP_CASTEiJ_G0030646	Zfp784	78	41.975
MGP_CASTEiJ_G0017709	-	84	36.782	MGP_CASTEiJ_G0030643	Zfp865	79	36.574
MGP_CASTEiJ_G0017709	-	80	37.500	MGP_CASTEiJ_G0029798	Repin1	100	37.079
MGP_CASTEiJ_G0017709	-	84	42.424	MGP_CASTEiJ_G0030966	Zfp59	80	42.424
MGP_CASTEiJ_G0017709	-	96	48.052	MGP_CASTEiJ_G0019962	Rslcan18	81	48.052
MGP_CASTEiJ_G0017709	-	81	48.187	MGP_CASTEiJ_G0028615	Zbtb49	78	44.872
MGP_CASTEiJ_G0017709	-	92	47.449	MGP_CASTEiJ_G0017666	Zfp672	93	42.254
MGP_CASTEiJ_G0017709	-	96	50.144	MGP_CASTEiJ_G0032779	Zfp882	99	45.064
MGP_CASTEiJ_G0017709	-	95	55.357	MGP_CASTEiJ_G0032778	Zfp709	99	55.357
MGP_CASTEiJ_G0017709	-	98	39.050	MGP_CASTEiJ_G0026068	Zfp334	99	41.626
MGP_CASTEiJ_G0017709	-	81	41.083	MGP_CASTEiJ_G0028178	Zbtb17	55	41.083
MGP_CASTEiJ_G0017709	-	96	47.283	MGP_CASTEiJ_G0022465	Zfp677	99	47.283
MGP_CASTEiJ_G0017709	-	96	46.491	MGP_CASTEiJ_G0022467	Zfp51	95	47.283
MGP_CASTEiJ_G0017709	-	95	49.123	MGP_CASTEiJ_G0025643	Zfp661	95	49.123
MGP_CASTEiJ_G0017709	-	95	39.600	MGP_CASTEiJ_G0033155	Zfp1	99	40.144