EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
Description
Ensembl ID
MGP_CASTEiJ_G0018021 (Gene tree)
Gene ID
-
Gene Symbol
Prpf8
Alias
AU019467|D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l
Full Name
pre-mRNA processing factor 8
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
24022 bases
Position
chr11:76036271-76060292
Accession
2179381
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0030161RRM_4PF10598.92.3e-4811
MGP_CASTEiJ_P0030159RRM_4PF10598.96e-4811
MGP_CASTEiJ_P0030160RRM_4PF10598.96e-4811
MGP_CASTEiJ_P0030159U5_2-snRNA_bdgPF10597.91.2e-7311
MGP_CASTEiJ_P0030160U5_2-snRNA_bdgPF10597.91.2e-7311
MGP_CASTEiJ_P0030159PRO8NTPF08082.112.4e-8611
MGP_CASTEiJ_P0030160PRO8NTPF08082.112.4e-8611
MGP_CASTEiJ_P0030161PRO8NTPF08082.113.1e-4312
MGP_CASTEiJ_P0030161PRO8NTPF08082.113.1e-4322
MGP_CASTEiJ_P0030159U6-snRNA_bdgPF10596.92.9e-8911
MGP_CASTEiJ_P0030160U6-snRNA_bdgPF10596.92.9e-8911
MGP_CASTEiJ_P0030161PROCNPF08083.115.2e-23611
MGP_CASTEiJ_P0030159PROCNPF08083.113.1e-23511
MGP_CASTEiJ_P0030160PROCNPF08083.113.1e-23511
MGP_CASTEiJ_P0030159PRP8_domainIVPF12134.85.4e-13011
MGP_CASTEiJ_P0030160PRP8_domainIVPF12134.85.4e-13011
MGP_CASTEiJ_P0030159PROCTPF08084.112.4e-5311
MGP_CASTEiJ_P0030160PROCTPF08084.112.4e-5311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0030162-721--- (aa)--
MGP_CASTEiJ_T0030161-3371-MGP_CASTEiJ_P00301611044 (aa)--
MGP_CASTEiJ_T0030159-7442-MGP_CASTEiJ_P00301592335 (aa)-Q99PV0
MGP_CASTEiJ_T0030160-7249-MGP_CASTEiJ_P00301602335 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0018021's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018021's network

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us