EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018075 (Gene tree)
Gene ID: -
Gene Symbol: Rab34
Alias: AI326479|Narr|Rah|Rah1
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 4241 bases
Position: chr11:78930737-78934977
Accession: 104606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0030446	MMR_HSR1	PF01926.23	1.4e-06	1	1
MGP_CASTEiJ_P0030445	MMR_HSR1	PF01926.23	1.5e-06	1	1
MGP_CASTEiJ_P0030447	MMR_HSR1	PF01926.23	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0030448	-	420	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030449	-	872	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030446	-	1270	-	MGP_CASTEiJ_P0030446	259 (aa)	-	-
MGP_CASTEiJ_T0030447	-	1557	-	MGP_CASTEiJ_P0030447	251 (aa)	-	-
MGP_CASTEiJ_T0030445	-	795	XM_011248824	MGP_CASTEiJ_P0030445	265 (aa)	-	A0A140LIX7

Gene Model

Click here to download MGP_CASTEiJ_G0018075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018075	Rab34	86	58.559	MGP_CASTEiJ_G0016681	Rab36	83	58.559
MGP_CASTEiJ_G0018075	Rab34	62	35.000	MGP_CASTEiJ_G0020554	Rab2b	78	35.714
MGP_CASTEiJ_G0018075	Rab34	62	31.875	MGP_CASTEiJ_G0018472	Rab5c	73	31.875
MGP_CASTEiJ_G0018075	Rab34	55	31.690	MGP_CASTEiJ_G0028465	Rheb	73	31.690
MGP_CASTEiJ_G0018075	Rab34	79	35.610	MGP_CASTEiJ_G0029079	Rab35	96	35.610
MGP_CASTEiJ_G0018075	Rab34	68	36.667	MGP_CASTEiJ_G0034188	Rab6b	85	36.667
MGP_CASTEiJ_G0018075	Rab34	62	33.750	MGP_CASTEiJ_G0026136	Rab22a	81	33.750
MGP_CASTEiJ_G0018075	Rab34	62	40.491	MGP_CASTEiJ_G0017380	Rab1a	77	40.491
MGP_CASTEiJ_G0018075	Rab34	67	30.220	MGP_CASTEiJ_G0021498	Rabl2	78	30.220
MGP_CASTEiJ_G0018075	Rab34	64	35.928	MGP_CASTEiJ_G0019160	Rab15	77	35.928
MGP_CASTEiJ_G0018075	Rab34	69	33.516	MGP_CASTEiJ_G0024846	Rab14	89	39.130
MGP_CASTEiJ_G0018075	Rab34	80	31.250	MGP_CASTEiJ_G0018675	Rab37	89	31.250
MGP_CASTEiJ_G0018075	Rab34	77	33.023	MGP_CASTEiJ_G0023193	Rab12	73	33.023
MGP_CASTEiJ_G0018075	Rab34	61	30.519	MGP_CASTEiJ_G0026561	Rab25	68	30.519
MGP_CASTEiJ_G0018075	Rab34	70	33.880	MGP_CASTEiJ_G0022763	Rab11b	78	34.426
MGP_CASTEiJ_G0018075	Rab34	64	35.152	MGP_CASTEiJ_G0027193	Rab2a	76	35.152
MGP_CASTEiJ_G0018075	Rab34	60	36.306	MGP_CASTEiJ_G0034827	Rab39b	73	36.306
MGP_CASTEiJ_G0018075	Rab34	62	35.625	MGP_CASTEiJ_G0031541	Rab30	77	35.625
MGP_CASTEiJ_G0018075	Rab34	62	40.373	MGP_CASTEiJ_G0023899	Rab1b	79	40.373
MGP_CASTEiJ_G0018075	Rab34	60	37.179	MGP_CASTEiJ_G0023184	Rab31	78	37.179
MGP_CASTEiJ_G0018075	Rab34	60	38.462	MGP_CASTEiJ_G0015254	Rab23	64	38.462
MGP_CASTEiJ_G0018075	Rab34	62	32.500	MGP_CASTEiJ_G0023094	Rab5a	73	32.500
MGP_CASTEiJ_G0018075	Rab34	53	41.135	MGP_CASTEiJ_G0034658	Rab33a	59	41.135