EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018172 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 26020 bases
Position: chr11:85192679-85218698
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0030798	ResIII	PF04851.15	1.3e-05	1	1
MGP_CASTEiJ_P0030798	DEAD	PF00270.29	9.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0030798	-	3171	-	MGP_CASTEiJ_P0030798	598 (aa)	-	Q8K301
MGP_CASTEiJ_T0030799	-	564	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0018172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018172	Ddx52	58	33.428	MGP_CASTEiJ_G0030485	Ddx47	83	32.011
MGP_CASTEiJ_G0018172	Ddx52	73	32.648	MGP_CASTEiJ_G0015890	Ddx59	64	33.741
MGP_CASTEiJ_G0018172	Ddx52	70	32.045	MGP_CASTEiJ_G0034550	Ddx3x	61	32.530
MGP_CASTEiJ_G0018172	Ddx52	63	31.915	MGP_CASTEiJ_G0033719	Ddx6	76	31.915
MGP_CASTEiJ_G0018172	Ddx52	60	32.044	MGP_CASTEiJ_G0021938	Eif4a2	90	30.240
MGP_CASTEiJ_G0018172	Ddx52	61	30.081	MGP_CASTEiJ_G0032713	Ddx49	76	30.081
MGP_CASTEiJ_G0018172	Ddx52	61	30.846	MGP_CASTEiJ_G0017334	Ddx56	80	33.971
MGP_CASTEiJ_G0018172	Ddx52	69	34.375	MGP_CASTEiJ_G0034068	Ddx43	63	34.375
MGP_CASTEiJ_G0018172	Ddx52	68	30.456	MGP_CASTEiJ_G0021336	Ddx17	62	30.843
MGP_CASTEiJ_G0018172	Ddx52	58	30.900	MGP_CASTEiJ_G0028995	Ddx51	64	30.900
MGP_CASTEiJ_G0018172	Ddx52	66	34.314	MGP_CASTEiJ_G0020197	Ddx4	57	34.314
MGP_CASTEiJ_G0018172	Ddx52	62	31.000	MGP_CASTEiJ_G0029202	Ddx55	63	31.000
MGP_CASTEiJ_G0018172	Ddx52	68	30.733	MGP_CASTEiJ_G0019865	Ddx41	66	30.733
MGP_CASTEiJ_G0018172	Ddx52	60	41.071	MGP_CASTEiJ_G0018908	Ddx1	55	41.071
MGP_CASTEiJ_G0018172	Ddx52	68	31.702	MGP_CASTEiJ_G0015762	Ddx18	55	32.732
MGP_CASTEiJ_G0018172	Ddx52	66	32.530	MGP_CASTEiJ_G0016265	D1Pas1	61	32.530
MGP_CASTEiJ_G0018172	Ddx52	70	30.222	MGP_CASTEiJ_G0021561	Ddx23	54	30.243