EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018204 (Gene tree)
Gene ID: -
Gene Symbol: Dhx40
Alias: 2410016C14Rik|ARG147|DDX40|PAD
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 40
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 41414 bases
Position: chr11:88208117-88249530
Accession: 1914737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0030960	DEAD	PF00270.29	7.2e-09	1	1
MGP_CASTEiJ_P0030961	HA2	PF04408.23	3.1e-15	1	1
MGP_CASTEiJ_P0030960	HA2	PF04408.23	7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0030961	-	912	-	MGP_CASTEiJ_P0030961	304 (aa)	-	-
MGP_CASTEiJ_T0030960	-	3813	-	MGP_CASTEiJ_P0030960	779 (aa)	-	Q6PE54
MGP_CASTEiJ_T0030963	-	626	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030962	-	642	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0018204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018204	Dhx40	83	42.041	MGP_CASTEiJ_G0029214	Dhx37	64	42.041
MGP_CASTEiJ_G0018204	Dhx40	99	32.766	MGP_CASTEiJ_G0017929	Dhx33	89	37.500
MGP_CASTEiJ_G0018204	Dhx40	90	35.262	MGP_CASTEiJ_G0025980	Dhx35	99	35.262
MGP_CASTEiJ_G0018204	Dhx40	84	40.429	MGP_CASTEiJ_G0033118	Dhx38	54	38.549
MGP_CASTEiJ_G0018204	Dhx40	58	31.417	MGP_CASTEiJ_G0019430	Tdrd9	89	31.417
MGP_CASTEiJ_G0018204	Dhx40	99	34.728	MGP_CASTEiJ_G0028651	Dhx15	79	43.103
MGP_CASTEiJ_G0018204	Dhx40	99	37.004	MGP_CASTEiJ_G0022875	Dhx16	61	42.012
MGP_CASTEiJ_G0018204	Dhx40	97	40.088	MGP_CASTEiJ_G0018516	Dhx8	50	43.645