EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018215 (Gene tree)
Gene ID: -
Gene Symbol: Sept4
Alias: ARTS|Bh5|OTTMUSG00000001265|Pnutl2|cell division control-related protein 2b|septin H5
Full Name: septin 4
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 23567 bases
Position: chr11:89048900-89072466
Accession: 1270156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0030999	MMR_HSR1	PF01926.23	4e-07	1	1
MGP_CASTEiJ_P0030994	MMR_HSR1	PF01926.23	6.4e-07	1	1
MGP_CASTEiJ_P0031005	MMR_HSR1	PF01926.23	7e-07	1	1
MGP_CASTEiJ_P0031002	MMR_HSR1	PF01926.23	8.1e-07	1	1
MGP_CASTEiJ_P0030992	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_CASTEiJ_P0031001	MMR_HSR1	PF01926.23	1.3e-06	1	1
MGP_CASTEiJ_P0031000	MMR_HSR1	PF01926.23	1.4e-06	1	1
MGP_CASTEiJ_P0030991	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0030991	-	666	XM_006532496	MGP_CASTEiJ_P0030991	213 (aa)	XP_006532559	P28661
MGP_CASTEiJ_T0030992	-	1678	-	MGP_CASTEiJ_P0030992	459 (aa)	-	-
MGP_CASTEiJ_T0030993	-	900	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030994	-	1303	-	MGP_CASTEiJ_P0030994	313 (aa)	-	-
MGP_CASTEiJ_T0030995	-	1884	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030996	-	1474	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030997	-	1449	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030998	-	1354	-	-	- (aa)	-	-
MGP_CASTEiJ_T0030999	-	759	-	MGP_CASTEiJ_P0030999	232 (aa)	-	-
MGP_CASTEiJ_T0031007	-	845	-	-	- (aa)	-	-
MGP_CASTEiJ_T0031006	-	560	-	-	- (aa)	-	-
MGP_CASTEiJ_T0031001	-	1651	-	MGP_CASTEiJ_P0031001	431 (aa)	-	-
MGP_CASTEiJ_T0031000	-	1724	-	MGP_CASTEiJ_P0031000	478 (aa)	-	-
MGP_CASTEiJ_T0031003	-	1250	-	-	- (aa)	-	-
MGP_CASTEiJ_T0031002	-	1243	-	MGP_CASTEiJ_P0031002	379 (aa)	-	-
MGP_CASTEiJ_T0031005	-	878	-	MGP_CASTEiJ_P0031005	280 (aa)	-	-
MGP_CASTEiJ_T0031004	-	2134	-	-	- (aa)	-	-
MGP_CASTEiJ_T0031008	-	535	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0018215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018215	Sept4	94	60.751	MGP_CASTEiJ_G0033500	Sept7	70	59.091
MGP_CASTEiJ_G0018215	Sept4	92	43.256	MGP_CASTEiJ_G0021739	Sept12	84	42.446
MGP_CASTEiJ_G0018215	Sept4	99	64.516	MGP_CASTEiJ_G0032053	Sept1	100	66.897
MGP_CASTEiJ_G0018215	Sept4	93	43.878	MGP_CASTEiJ_G0017614	Sept8	66	43.878
MGP_CASTEiJ_G0018215	Sept4	93	43.878	MGP_CASTEiJ_G0016585	Sept10	67	43.878
MGP_CASTEiJ_G0018215	Sept4	92	51.903	MGP_CASTEiJ_G0021397	Sept3	92	49.682
MGP_CASTEiJ_G0018215	Sept4	97	66.230	MGP_CASTEiJ_G0015692	Sept2	100	65.421
MGP_CASTEiJ_G0018215	Sept4	93	43.390	MGP_CASTEiJ_G0034606	Sept6	67	43.390
MGP_CASTEiJ_G0018215	Sept4	93	43.878	MGP_CASTEiJ_G0028867	Sept11	67	43.878
MGP_CASTEiJ_G0018215	Sept4	92	50.467	MGP_CASTEiJ_G0018749	Sept9	81	52.551
MGP_CASTEiJ_G0018215	Sept4	95	83.108	MGP_CASTEiJ_G0021876	Sept5	97	76.359