EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018229 (Gene tree)
Gene ID: -
Gene Symbol: Srsf1
Alias: 1110054N12Rik|5730507C05Rik|6330415C05Rik|AI482334|AW491331|Asf|Sf2|Sfrs1
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 6387 bases
Position: chr11:89583023-89589409
Accession: 98283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0031063	RRM_1	PF00076.22	6.3e-34	1	2
MGP_CASTEiJ_P0031063	RRM_1	PF00076.22	6.3e-34	2	2
MGP_CASTEiJ_P0031062	RRM_1	PF00076.22	2.5e-33	1	2
MGP_CASTEiJ_P0031062	RRM_1	PF00076.22	2.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0031068	-	758	-	-	- (aa)	-	-
MGP_CASTEiJ_T0031063	-	2948	-	MGP_CASTEiJ_P0031063	201 (aa)	-	-
MGP_CASTEiJ_T0031062	-	5366	-	MGP_CASTEiJ_P0031062	248 (aa)	-	Q6PDM2
MGP_CASTEiJ_T0031067	-	401	-	MGP_CASTEiJ_P0031067	57 (aa)	-	-
MGP_CASTEiJ_T0031066	-	896	-	MGP_CASTEiJ_P0031066	105 (aa)	-	-
MGP_CASTEiJ_T0031065	-	1123	-	MGP_CASTEiJ_P0031065	253 (aa)	-	-
MGP_CASTEiJ_T0031064	-	645	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0018229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018229	Srsf1	82	42.857	MGP_CASTEiJ_G0025991	Srsf6	58	40.670
MGP_CASTEiJ_G0018229	Srsf1	79	79.762	MGP_CASTEiJ_G0029069	Srsf9	78	70.330