EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018355 (Gene tree)
Gene ID: -
Gene Symbol: Arl5c
Alias: Arl12|BC065791
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 7528 bases
Position: chr11:100304403-100311930
Accession: 3028577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0031603	MMR_HSR1	PF01926.23	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0031603	-	1573	-	MGP_CASTEiJ_P0031603	179 (aa)	-	Q6P068
MGP_CASTEiJ_T0031605	-	816	-	MGP_CASTEiJ_P0031605	98 (aa)	-	-
MGP_CASTEiJ_T0031604	-	520	-	MGP_CASTEiJ_P0031604	131 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0018355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018355	Arl5c	99	38.043	MGP_CASTEiJ_G0022188	Arl6	98	38.043
MGP_CASTEiJ_G0018355	Arl5c	88	45.570	MGP_CASTEiJ_G0016961	Arl1	94	44.186
MGP_CASTEiJ_G0018355	Arl5c	88	41.772	MGP_CASTEiJ_G0023957	Arl2	86	41.772
MGP_CASTEiJ_G0018355	Arl5c	84	41.509	MGP_CASTEiJ_G0015639	Arl4c	82	41.509
MGP_CASTEiJ_G0018355	Arl5c	79	31.068	MGP_CASTEiJ_G0017591	Sar1b	52	31.068
MGP_CASTEiJ_G0018355	Arl5c	76	30.476	MGP_CASTEiJ_G0018675	Rab37	55	30.000
MGP_CASTEiJ_G0018355	Arl5c	98	43.750	MGP_CASTEiJ_G0021565	Arf3	97	43.750
MGP_CASTEiJ_G0018355	Arl5c	87	39.506	MGP_CASTEiJ_G0019000	Arl4a	81	39.506
MGP_CASTEiJ_G0018355	Arl5c	63	30.702	MGP_CASTEiJ_G0019834	Arl10	55	30.702
MGP_CASTEiJ_G0018355	Arl5c	96	37.705	MGP_CASTEiJ_G0026195	Arfrp1	93	40.708
MGP_CASTEiJ_G0018355	Arl5c	96	42.197	MGP_CASTEiJ_G0029606	Arf5	96	42.197
MGP_CASTEiJ_G0018355	Arl5c	61	30.588	MGP_CASTEiJ_G0024846	Rab14	56	30.588
MGP_CASTEiJ_G0018355	Arl5c	98	74.286	MGP_CASTEiJ_G0024562	Arl5b	97	74.286
MGP_CASTEiJ_G0018355	Arl5c	87	38.462	MGP_CASTEiJ_G0020697	Arl11	89	38.462
MGP_CASTEiJ_G0018355	Arl5c	63	30.000	MGP_CASTEiJ_G0027193	Rab2a	55	30.000
MGP_CASTEiJ_G0018355	Arl5c	64	31.461	MGP_CASTEiJ_G0030093	Rab7	91	31.461
MGP_CASTEiJ_G0018355	Arl5c	96	41.040	MGP_CASTEiJ_G0024407	Arl3	95	41.040
MGP_CASTEiJ_G0018355	Arl5c	88	37.500	MGP_CASTEiJ_G0026458	Arl14	83	37.500