EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0018551 (Gene tree)
Gene ID
-
Gene Symbol
Eftud2
Alias
116kDa|Snrp116|U5-116kD
Full Name
elongation factor Tu GTP binding domain containing 2
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
47138 bases
Position
chr11:105737921-105785058
Accession
1336880
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0032370GTP_EFTUPF00009.276.1e-4511
MGP_CASTEiJ_P0032371GTP_EFTUPF00009.276.1e-4511
MGP_CASTEiJ_P0032373GTP_EFTUPF00009.272.3e-3711
MGP_CASTEiJ_P0032373GTP_EFTU_D2PF03144.251.7e-1211
MGP_CASTEiJ_P0032370GTP_EFTU_D2PF03144.251.8e-1211
MGP_CASTEiJ_P0032371GTP_EFTU_D2PF03144.251.8e-1211
MGP_CASTEiJ_P0032373EFG_IVPF03764.184.2e-2311
MGP_CASTEiJ_P0032370EFG_IVPF03764.184.3e-2311
MGP_CASTEiJ_P0032371EFG_IVPF03764.184.3e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0032376-934--- (aa)--
MGP_CASTEiJ_T0032377-605--- (aa)--
MGP_CASTEiJ_T0032374-567-MGP_CASTEiJ_P003237484 (aa)--
MGP_CASTEiJ_T0032367-3083XM_006532665MGP_CASTEiJ_P0032367978 (aa)XP_006532728O08810
MGP_CASTEiJ_T0032372-397-MGP_CASTEiJ_P003237297 (aa)--
MGP_CASTEiJ_T0032373-2889-MGP_CASTEiJ_P0032373962 (aa)--
MGP_CASTEiJ_T0032370-3324-MGP_CASTEiJ_P0032370972 (aa)--
MGP_CASTEiJ_T0032371-3342-MGP_CASTEiJ_P0032371972 (aa)--
MGP_CASTEiJ_T0032382-796--- (aa)--
MGP_CASTEiJ_T0032378-679-MGP_CASTEiJ_P003237830 (aa)--
MGP_CASTEiJ_T0032379-1307--- (aa)--
MGP_CASTEiJ_T0032375-631--- (aa)--
MGP_CASTEiJ_T0032381-581--- (aa)--
MGP_CASTEiJ_T0032380-3142--- (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0018551's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018551's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0018551Eftud28646.835MGP_CASTEiJ_G0016869Eef29939.175
MGP_CASTEiJ_G0018551Eftud27333.803MGP_CASTEiJ_G0031476Efl17339.306

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