EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018658 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf4l
Alias: 0610010C04Rik|1500000C01Rik|D11Ertd636e
Full Name: cleavage and polyadenylation specific factor 4-like
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 15519 bases
Position: chr11:117400536-117416054
Accession: 1277182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0032879	zf-CCCH	PF00642.24	1.7e-08	1	1
MGP_CASTEiJ_P0032877	zf-CCCH	PF00642.24	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0032879	-	1123	-	MGP_CASTEiJ_P0032879	153 (aa)	-	-
MGP_CASTEiJ_T0032878	-	1375	-	MGP_CASTEiJ_P0032878	280 (aa)	-	-
MGP_CASTEiJ_T0032880	-	1000	-	-	- (aa)	-	-
MGP_CASTEiJ_T0032877	-	1213	-	MGP_CASTEiJ_P0032877	228 (aa)	-	-
MGP_CASTEiJ_T0032876	-	1235	XM_006533700	MGP_CASTEiJ_P0032876	190 (aa)	XP_006533764	A2A6P9

Gene Model

Click here to download MGP_CASTEiJ_G0018658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018658	Cpsf4l	82	62.400	MGP_CASTEiJ_G0029462	Cpsf4	86	52.358