EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018749 (Gene tree)
Gene ID: -
Gene Symbol: Sept9
Alias: Kiaa0991|MSF1|Msf|PNUTL4|SL3-3 integration site 1|Sint1
Full Name: septin 9
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 172006 bases
Position: chr11:121286253-121458258
Accession: 1858222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0033369	MMR_HSR1	PF01926.23	1.3e-09	1	1
MGP_CASTEiJ_P0033367	MMR_HSR1	PF01926.23	6e-09	1	1
MGP_CASTEiJ_P0033365	MMR_HSR1	PF01926.23	6.3e-09	1	1
MGP_CASTEiJ_P0033366	MMR_HSR1	PF01926.23	6.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0033372	-	555	-	-	- (aa)	-	-
MGP_CASTEiJ_T0033368	-	374	-	MGP_CASTEiJ_P0033368	74 (aa)	-	-
MGP_CASTEiJ_T0033369	-	778	-	MGP_CASTEiJ_P0033369	242 (aa)	-	-
MGP_CASTEiJ_T0033366	-	1997	-	MGP_CASTEiJ_P0033366	603 (aa)	-	-
MGP_CASTEiJ_T0033367	-	3862	-	MGP_CASTEiJ_P0033367	565 (aa)	-	-
MGP_CASTEiJ_T0033365	-	1937	XM_006533744	MGP_CASTEiJ_P0033365	583 (aa)	XP_006533807	Q80UG5
MGP_CASTEiJ_T0033371	-	646	-	-	- (aa)	-	-
MGP_CASTEiJ_T0033370	-	4587	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0018749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018749	Sept9	81	52.551	MGP_CASTEiJ_G0018215	Sept4	92	50.467
MGP_CASTEiJ_G0018749	Sept9	81	51.269	MGP_CASTEiJ_G0033500	Sept7	68	49.502
MGP_CASTEiJ_G0018749	Sept9	88	49.767	MGP_CASTEiJ_G0015692	Sept2	100	49.778
MGP_CASTEiJ_G0018749	Sept9	81	45.455	MGP_CASTEiJ_G0017614	Sept8	68	42.000
MGP_CASTEiJ_G0018749	Sept9	83	46.000	MGP_CASTEiJ_G0032053	Sept1	100	50.000
MGP_CASTEiJ_G0018749	Sept9	82	75.377	MGP_CASTEiJ_G0021397	Sept3	87	73.720
MGP_CASTEiJ_G0018749	Sept9	81	46.970	MGP_CASTEiJ_G0034606	Sept6	99	36.552
MGP_CASTEiJ_G0018749	Sept9	81	46.970	MGP_CASTEiJ_G0028867	Sept11	67	42.953
MGP_CASTEiJ_G0018749	Sept9	88	49.057	MGP_CASTEiJ_G0021876	Sept5	85	45.860
MGP_CASTEiJ_G0018749	Sept9	81	44.949	MGP_CASTEiJ_G0016585	Sept10	67	43.836
MGP_CASTEiJ_G0018749	Sept9	82	64.322	MGP_CASTEiJ_G0021739	Sept12	78	65.462