EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0018751 (Gene tree)
Gene ID
-
Gene Symbol
Tnrc6c
Alias
9930033H14Rik|mKIAA1582
Full Name
trinucleotide repeat containing 6C
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
114827 bases
Position
chr11:121781438-121896264
Accession
2443265
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0033377Ago_hookPF10427.91.5e-2311
MGP_CASTEiJ_P0033374Ago_hookPF10427.97.7e-2311
MGP_CASTEiJ_P0033376Ago_hookPF10427.97.7e-2311
MGP_CASTEiJ_P0033377RRM_1PF00076.220.0004211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0033379-1829--- (aa)--
MGP_CASTEiJ_T0033378-741--- (aa)--
MGP_CASTEiJ_T0033375-11570--- (aa)--
MGP_CASTEiJ_T0033374-8747XM_006533109MGP_CASTEiJ_P00333741900 (aa)XP_006533172B1ATC3
MGP_CASTEiJ_T0033377-6610-MGP_CASTEiJ_P00333771732 (aa)--
MGP_CASTEiJ_T0033376-8870-MGP_CASTEiJ_P00333761900 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0018751's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018751's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0018751Tnrc6c9936.215MGP_CASTEiJ_G0021362Tnrc6b9637.413
MGP_CASTEiJ_G0018751Tnrc6c9940.765MGP_CASTEiJ_G0031985Tnrc6a9844.347

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