EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0018773 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Minus strand
Length
438256 bases
Position
chr11:122669842-123108097
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0033480Fox-1_CPF12414.82.3e-4511
MGP_CASTEiJ_P0033485Fox-1_CPF12414.82.3e-4511
MGP_CASTEiJ_P0033486Fox-1_CPF12414.82.3e-4511
MGP_CASTEiJ_P0033482Fox-1_CPF12414.82.7e-4111
MGP_CASTEiJ_P0033484Fox-1_CPF12414.82.8e-4111
MGP_CASTEiJ_P0033479Fox-1_CPF12414.83.2e-4111
MGP_CASTEiJ_P0033487Fox-1_CPF12414.81.7e-2111
MGP_CASTEiJ_P0033488RRM_1PF00076.223.2e-1911
MGP_CASTEiJ_P0033480RRM_1PF00076.221.6e-1811
MGP_CASTEiJ_P0033485RRM_1PF00076.221.6e-1811
MGP_CASTEiJ_P0033486RRM_1PF00076.221.7e-1811
MGP_CASTEiJ_P0033479RRM_1PF00076.222e-1811
MGP_CASTEiJ_P0033484RRM_1PF00076.222.1e-1811
MGP_CASTEiJ_P0033487RRM_1PF00076.222e-1411
MGP_CASTEiJ_P0033482RRM_1PF00076.220.0003711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0033479-3066XM_006533722MGP_CASTEiJ_P0033479360 (aa)XP_006533785Q8BIF2
MGP_CASTEiJ_T0033490-369--- (aa)--
MGP_CASTEiJ_T0033489-301--- (aa)--
MGP_CASTEiJ_T0033488-900-MGP_CASTEiJ_P0033488169 (aa)--
MGP_CASTEiJ_T0033483-1026-MGP_CASTEiJ_P0033483303 (aa)--
MGP_CASTEiJ_T0033482-1553-MGP_CASTEiJ_P0033482329 (aa)--
MGP_CASTEiJ_T0033481-885-MGP_CASTEiJ_P0033481256 (aa)--
MGP_CASTEiJ_T0033480-2794-MGP_CASTEiJ_P0033480313 (aa)--
MGP_CASTEiJ_T0033487-710-MGP_CASTEiJ_P0033487145 (aa)--
MGP_CASTEiJ_T0033486-2151-MGP_CASTEiJ_P0033486327 (aa)--
MGP_CASTEiJ_T0033485-1542-MGP_CASTEiJ_P0033485313 (aa)--
MGP_CASTEiJ_T0033484-3139-MGP_CASTEiJ_P0033484374 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0018773's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018773's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0018773Rbfox39961.932MGP_CASTEiJ_G0021279Rbfox29161.408
MGP_CASTEiJ_G0018773Rbfox36739.130MGP_CASTEiJ_G0027867Pabpc45636.709
MGP_CASTEiJ_G0018773Rbfox37231.429MGP_CASTEiJ_G0015387Boll5043.939
MGP_CASTEiJ_G0018773Rbfox35331.868MGP_CASTEiJ_G0032110Tial18131.111
MGP_CASTEiJ_G0018773Rbfox310071.930MGP_CASTEiJ_G0021750Rbfox19164.850

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