EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0018908 (Gene tree)
Gene ID: -
Gene Symbol: Ddx1
Alias: AA409185|DBP-RB
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 28608 bases
Position: chr12:10452915-10481522
Accession: 2144727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0034086	DEAD	PF00270.29	2.7e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0034086	-	2507	-	MGP_CASTEiJ_P0034086	740 (aa)	-	Q91VR5
MGP_CASTEiJ_T0034087	-	613	-	MGP_CASTEiJ_P0034087	157 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0018908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0018908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0018908	Ddx1	63	40.909	MGP_CASTEiJ_G0032713	Ddx49	96	40.909
MGP_CASTEiJ_G0018908	Ddx1	53	40.678	MGP_CASTEiJ_G0033719	Ddx6	69	40.678
MGP_CASTEiJ_G0018908	Ddx1	54	36.471	MGP_CASTEiJ_G0022856	Ddx39b	70	34.286
MGP_CASTEiJ_G0018908	Ddx1	54	35.294	MGP_CASTEiJ_G0018781	Eif4a3	63	32.143
MGP_CASTEiJ_G0018908	Ddx1	60	46.875	MGP_CASTEiJ_G0030485	Ddx47	86	46.875
MGP_CASTEiJ_G0018908	Ddx1	55	41.071	MGP_CASTEiJ_G0018172	Ddx52	60	41.071
MGP_CASTEiJ_G0018908	Ddx1	97	33.548	MGP_CASTEiJ_G0019865	Ddx41	57	40.580
MGP_CASTEiJ_G0018908	Ddx1	53	38.710	MGP_CASTEiJ_G0033086	Ddx28	67	38.710
MGP_CASTEiJ_G0018908	Ddx1	53	50.847	MGP_CASTEiJ_G0017334	Ddx56	82	50.000