EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0019430 (Gene tree)
Gene ID: -
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 98310 bases
Position: chr12:108510187-108608496
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0035690	TUDOR	PF00567.24	7e-15	1	1
MGP_CASTEiJ_P0035690	DEAD	PF00270.29	1.2e-07	1	1
MGP_CASTEiJ_P0035690	HA2	PF04408.23	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0035698	-	799	-	-	- (aa)	-	-
MGP_CASTEiJ_T0035699	-	456	-	-	- (aa)	-	-
MGP_CASTEiJ_T0035696	-	3681	-	MGP_CASTEiJ_P0035696	216 (aa)	-	-
MGP_CASTEiJ_T0035697	-	3366	-	MGP_CASTEiJ_P0035697	539 (aa)	-	-
MGP_CASTEiJ_T0035690	-	4807	XM_006516316	MGP_CASTEiJ_P0035690	1383 (aa)	XP_006516379	Q14BI7
MGP_CASTEiJ_T0035700	-	486	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0019430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0019430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0019430	Tdrd9	88	30.081	MGP_CASTEiJ_G0028651	Dhx15	71	30.081
MGP_CASTEiJ_G0019430	Tdrd9	89	31.417	MGP_CASTEiJ_G0018204	Dhx40	58	31.417
MGP_CASTEiJ_G0019430	Tdrd9	95	32.448	MGP_CASTEiJ_G0017929	Dhx33	81	30.684
MGP_CASTEiJ_G0019430	Tdrd9	99	34.079	MGP_CASTEiJ_G0026427	Dhx36	57	34.171
MGP_CASTEiJ_G0019430	Tdrd9	95	33.843	MGP_CASTEiJ_G0034331	Dhx30	50	32.248