EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0019561 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan4
Alias: AI841875|Gm11272|OTTMUSG00000000421
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 6574 bases
Position: chr13:18539400-18545973
Accession: 3649412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0036067	zf-C2H2	PF00096.26	9.2e-41	1	7
MGP_CASTEiJ_P0036067	zf-C2H2	PF00096.26	9.2e-41	2	7
MGP_CASTEiJ_P0036067	zf-C2H2	PF00096.26	9.2e-41	3	7
MGP_CASTEiJ_P0036067	zf-C2H2	PF00096.26	9.2e-41	4	7
MGP_CASTEiJ_P0036067	zf-C2H2	PF00096.26	9.2e-41	5	7
MGP_CASTEiJ_P0036067	zf-C2H2	PF00096.26	9.2e-41	6	7
MGP_CASTEiJ_P0036067	zf-C2H2	PF00096.26	9.2e-41	7	7
MGP_CASTEiJ_P0036067	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0036067	-	2399	-	MGP_CASTEiJ_P0036067	478 (aa)	-	Q5SZT6

Gene Model

Click here to download MGP_CASTEiJ_G0019561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0019561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0019561	Zkscan4	64	47.186	MGP_CASTEiJ_G0025643	Zfp661	55	47.186
MGP_CASTEiJ_G0019561	Zkscan4	59	49.782	MGP_CASTEiJ_G0019986	-	97	49.782
MGP_CASTEiJ_G0019561	Zkscan4	57	46.774	MGP_CASTEiJ_G0029798	Repin1	95	46.774
MGP_CASTEiJ_G0019561	Zkscan4	57	51.695	MGP_CASTEiJ_G0021271	Zfp251	73	49.780
MGP_CASTEiJ_G0019561	Zkscan4	54	47.032	MGP_CASTEiJ_G0032779	Zfp882	85	47.032
MGP_CASTEiJ_G0019561	Zkscan4	51	49.000	MGP_CASTEiJ_G0022467	Zfp51	88	49.000
MGP_CASTEiJ_G0019561	Zkscan4	64	44.720	MGP_CASTEiJ_G0028615	Zbtb49	66	47.222
MGP_CASTEiJ_G0019561	Zkscan4	56	50.000	MGP_CASTEiJ_G0023809	Zfp236	73	46.835
MGP_CASTEiJ_G0019561	Zkscan4	54	49.045	MGP_CASTEiJ_G0022483	Zfp945	92	45.872
MGP_CASTEiJ_G0019561	Zkscan4	51	49.569	MGP_CASTEiJ_G0017568	Zfp454	86	47.951
MGP_CASTEiJ_G0019561	Zkscan4	57	44.068	MGP_CASTEiJ_G0032778	Zfp709	82	51.701
MGP_CASTEiJ_G0019561	Zkscan4	53	41.704	MGP_CASTEiJ_G0032062	-	58	41.704
MGP_CASTEiJ_G0019561	Zkscan4	53	41.704	MGP_CASTEiJ_G0032061	-	58	41.704
MGP_CASTEiJ_G0019561	Zkscan4	53	56.863	MGP_CASTEiJ_G0033485	Zfp872	82	56.863
MGP_CASTEiJ_G0019561	Zkscan4	82	46.759	MGP_CASTEiJ_G0019982	Zfp748	93	46.759
MGP_CASTEiJ_G0019561	Zkscan4	53	52.381	MGP_CASTEiJ_G0030898	Zfp574	59	49.057
MGP_CASTEiJ_G0019561	Zkscan4	53	47.826	MGP_CASTEiJ_G0029924	Prdm5	78	47.826
MGP_CASTEiJ_G0019561	Zkscan4	95	44.828	MGP_CASTEiJ_G0022489	Zscan10	98	50.336
MGP_CASTEiJ_G0019561	Zkscan4	53	41.704	MGP_CASTEiJ_G0032063	-	58	41.704
MGP_CASTEiJ_G0019561	Zkscan4	53	52.419	MGP_CASTEiJ_G0033422	Zfp26	79	52.419
MGP_CASTEiJ_G0019561	Zkscan4	56	44.444	MGP_CASTEiJ_G0019963	Zfp759	89	44.800
MGP_CASTEiJ_G0019561	Zkscan4	59	41.608	MGP_CASTEiJ_G0019962	Rslcan18	76	45.455
MGP_CASTEiJ_G0019561	Zkscan4	53	55.090	MGP_CASTEiJ_G0033155	Zfp1	67	55.090
MGP_CASTEiJ_G0019561	Zkscan4	53	45.852	MGP_CASTEiJ_G0017666	Zfp672	99	41.975
MGP_CASTEiJ_G0019561	Zkscan4	50	52.632	MGP_CASTEiJ_G0032059	Zfp768	51	52.632
MGP_CASTEiJ_G0019561	Zkscan4	50	52.756	MGP_CASTEiJ_G0030265	Zfp637	75	49.664
MGP_CASTEiJ_G0019561	Zkscan4	53	44.545	MGP_CASTEiJ_G0017709	-	77	45.217
MGP_CASTEiJ_G0019561	Zkscan4	54	52.055	MGP_CASTEiJ_G0030966	Zfp59	78	52.055
MGP_CASTEiJ_G0019561	Zkscan4	53	35.882	MGP_CASTEiJ_G0033000	Zfp319	87	38.158
MGP_CASTEiJ_G0019561	Zkscan4	53	37.561	MGP_CASTEiJ_G0026106	Zfp64	75	37.561
MGP_CASTEiJ_G0019561	Zkscan4	53	51.046	MGP_CASTEiJ_G0030869	Zfp94	72	46.696
MGP_CASTEiJ_G0019561	Zkscan4	51	49.286	MGP_CASTEiJ_G0030868	Zfp61	52	49.286
MGP_CASTEiJ_G0019561	Zkscan4	65	47.845	MGP_CASTEiJ_G0030861	Zfp112	56	48.085
MGP_CASTEiJ_G0019561	Zkscan4	50	49.315	MGP_CASTEiJ_G0030867	Zfp93	50	48.052
MGP_CASTEiJ_G0019561	Zkscan4	53	48.673	MGP_CASTEiJ_G0030866	Zfp108	73	48.673
MGP_CASTEiJ_G0019561	Zkscan4	51	45.860	MGP_CASTEiJ_G0030635	Zfp628	63	43.128
MGP_CASTEiJ_G0019561	Zkscan4	54	53.712	MGP_CASTEiJ_G0031027	Zfp420	99	52.423
MGP_CASTEiJ_G0019561	Zkscan4	53	59.048	MGP_CASTEiJ_G0019990	Zfp493	56	59.048
MGP_CASTEiJ_G0019561	Zkscan4	70	45.106	MGP_CASTEiJ_G0022465	Zfp677	89	45.106
MGP_CASTEiJ_G0019561	Zkscan4	58	45.778	MGP_CASTEiJ_G0031153	Zfp715	71	45.778
MGP_CASTEiJ_G0019561	Zkscan4	57	52.414	MGP_CASTEiJ_G0026068	Zfp334	73	52.414