EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0019890 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa0
Alias: 1110055B05Rik|3010025E17Rik|Hnrpa0|hnRNP A0
Full Name: heterogeneous nuclear ribonucleoprotein A0
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 2672 bases
Position: chr13:57200772-57203443
Accession: 1924384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0036930	RRM_1	PF00076.22	4.2e-31	1	2
MGP_CASTEiJ_P0036930	RRM_1	PF00076.22	4.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0036930	-	2672	-	MGP_CASTEiJ_P0036930	306 (aa)	-	Q9CX86

Gene Model

Click here to download MGP_CASTEiJ_G0019890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0019890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0019890	Hnrnpa0	71	31.915	MGP_CASTEiJ_G0016822	-	99	34.615
MGP_CASTEiJ_G0019890	Hnrnpa0	59	41.989	MGP_CASTEiJ_G0018234	Msi2	99	41.228
MGP_CASTEiJ_G0019890	Hnrnpa0	58	35.882	MGP_CASTEiJ_G0017584	Hnrnpab	57	35.882
MGP_CASTEiJ_G0019890	Hnrnpa0	54	35.065	MGP_CASTEiJ_G0034713	Rbmx	82	33.333
MGP_CASTEiJ_G0019890	Hnrnpa0	91	49.458	MGP_CASTEiJ_G0029831	Hnrnpa2b1	72	57.233
MGP_CASTEiJ_G0019890	Hnrnpa0	56	34.706	MGP_CASTEiJ_G0028892	Hnrnpdl	51	34.706
MGP_CASTEiJ_G0019890	Hnrnpa0	73	39.474	MGP_CASTEiJ_G0028890	Hnrnpd	77	36.257
MGP_CASTEiJ_G0019890	Hnrnpa0	59	43.646	MGP_CASTEiJ_G0029073	Msi1	57	42.949