EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0019986 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 17636 bases
Position: chr13:66462018-66479653
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	1	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	2	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	3	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	4	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	5	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	6	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	7	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	8	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	9	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	10	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	11	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	12	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	13	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	14	15
MGP_CASTEiJ_P0037171	zf-C2H2	PF00096.26	3.6e-75	15	15
MGP_CASTEiJ_P0037171	zf-met	PF12874.7	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0037171	-	3893	-	MGP_CASTEiJ_P0037171	533 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0019986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0019986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0019986	-	94	49.485	MGP_CASTEiJ_G0028615	Zbtb49	90	50.704
MGP_CASTEiJ_G0019986	-	97	64.718	MGP_CASTEiJ_G0019963	Zfp759	90	64.718
MGP_CASTEiJ_G0019986	-	94	41.406	MGP_CASTEiJ_G0017666	Zfp672	100	41.250
MGP_CASTEiJ_G0019986	-	96	39.781	MGP_CASTEiJ_G0030635	Zfp628	60	39.927
MGP_CASTEiJ_G0019986	-	88	46.903	MGP_CASTEiJ_G0028178	Zbtb17	58	46.903
MGP_CASTEiJ_G0019986	-	98	38.806	MGP_CASTEiJ_G0022489	Zscan10	78	37.811
MGP_CASTEiJ_G0019986	-	94	47.216	MGP_CASTEiJ_G0022483	Zfp945	99	47.216
MGP_CASTEiJ_G0019986	-	96	32.809	MGP_CASTEiJ_G0029798	Repin1	93	33.202
MGP_CASTEiJ_G0019986	-	93	50.000	MGP_CASTEiJ_G0028956	Gfi1	100	50.000
MGP_CASTEiJ_G0019986	-	97	46.341	MGP_CASTEiJ_G0032061	-	61	44.444
MGP_CASTEiJ_G0019986	-	97	46.341	MGP_CASTEiJ_G0032062	-	61	44.444
MGP_CASTEiJ_G0019986	-	97	46.341	MGP_CASTEiJ_G0032063	-	61	44.444
MGP_CASTEiJ_G0019986	-	95	50.862	MGP_CASTEiJ_G0030265	Zfp637	73	49.479
MGP_CASTEiJ_G0019986	-	93	52.066	MGP_CASTEiJ_G0022465	Zfp677	79	52.066
MGP_CASTEiJ_G0019986	-	96	49.004	MGP_CASTEiJ_G0022467	Zfp51	90	49.004
MGP_CASTEiJ_G0019986	-	96	45.122	MGP_CASTEiJ_G0023809	Zfp236	67	45.122
MGP_CASTEiJ_G0019986	-	94	55.422	MGP_CASTEiJ_G0019962	Rslcan18	70	55.422
MGP_CASTEiJ_G0019986	-	95	39.867	MGP_CASTEiJ_G0029924	Prdm5	81	45.802
MGP_CASTEiJ_G0019986	-	94	48.750	MGP_CASTEiJ_G0026068	Zfp334	75	48.750
MGP_CASTEiJ_G0019986	-	94	52.263	MGP_CASTEiJ_G0025643	Zfp661	64	52.174
MGP_CASTEiJ_G0019986	-	95	52.349	MGP_CASTEiJ_G0033485	Zfp872	85	51.623
MGP_CASTEiJ_G0019986	-	93	52.439	MGP_CASTEiJ_G0030867	Zfp93	74	52.439
MGP_CASTEiJ_G0019986	-	96	41.441	MGP_CASTEiJ_G0030643	Zfp865	79	34.247
MGP_CASTEiJ_G0019986	-	95	52.676	MGP_CASTEiJ_G0017568	Zfp454	88	54.248
MGP_CASTEiJ_G0019986	-	95	39.286	MGP_CASTEiJ_G0033000	Zfp319	91	38.953
MGP_CASTEiJ_G0019986	-	95	52.209	MGP_CASTEiJ_G0033422	Zfp26	80	52.209
MGP_CASTEiJ_G0019986	-	94	50.394	MGP_CASTEiJ_G0030866	Zfp108	73	51.408
MGP_CASTEiJ_G0019986	-	96	54.911	MGP_CASTEiJ_G0030868	Zfp61	56	54.911
MGP_CASTEiJ_G0019986	-	95	54.455	MGP_CASTEiJ_G0030869	Zfp94	75	54.455
MGP_CASTEiJ_G0019986	-	95	49.462	MGP_CASTEiJ_G0017709	-	89	49.852
MGP_CASTEiJ_G0019986	-	94	53.172	MGP_CASTEiJ_G0021271	Zfp251	70	53.172
MGP_CASTEiJ_G0019986	-	94	56.627	MGP_CASTEiJ_G0031027	Zfp420	99	56.627
MGP_CASTEiJ_G0019986	-	95	52.436	MGP_CASTEiJ_G0030861	Zfp112	67	52.436
MGP_CASTEiJ_G0019986	-	94	49.772	MGP_CASTEiJ_G0033155	Zfp1	76	48.148
MGP_CASTEiJ_G0019986	-	95	35.768	MGP_CASTEiJ_G0015901	Zbtb41	59	35.768
MGP_CASTEiJ_G0019986	-	96	47.923	MGP_CASTEiJ_G0030966	Zfp59	80	47.923
MGP_CASTEiJ_G0019986	-	95	56.436	MGP_CASTEiJ_G0019982	Zfp748	93	57.082
MGP_CASTEiJ_G0019986	-	93	67.391	MGP_CASTEiJ_G0019990	Zfp493	62	67.391
MGP_CASTEiJ_G0019986	-	93	51.899	MGP_CASTEiJ_G0031153	Zfp715	71	51.899
MGP_CASTEiJ_G0019986	-	94	49.462	MGP_CASTEiJ_G0032059	Zfp768	55	49.291
MGP_CASTEiJ_G0019986	-	97	49.782	MGP_CASTEiJ_G0019561	Zkscan4	59	49.782
MGP_CASTEiJ_G0019986	-	95	50.625	MGP_CASTEiJ_G0032778	Zfp709	86	50.515
MGP_CASTEiJ_G0019986	-	94	45.570	MGP_CASTEiJ_G0032779	Zfp882	85	51.827
MGP_CASTEiJ_G0019986	-	96	45.833	MGP_CASTEiJ_G0026106	Zfp64	71	45.205
MGP_CASTEiJ_G0019986	-	99	48.148	MGP_CASTEiJ_G0030898	Zfp574	95	32.088