EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0020554 (Gene tree)
Gene ID: -
Gene Symbol: Rab2b
Alias: 1500012D09Rik|4930528G15Rik|A230002G14|D530043M21Rik|Rab2B
Full Name: RAB2B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 17509 bases
Position: chr14:43490185-43507693
Accession: 1923588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0039030	MMR_HSR1	PF01926.23	0.00011	1	1
MGP_CASTEiJ_P0039027	MMR_HSR1	PF01926.23	0.00012	1	1
MGP_CASTEiJ_P0039028	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0039029	-	3580	-	-	- (aa)	-	-
MGP_CASTEiJ_T0039028	-	1573	-	MGP_CASTEiJ_P0039028	216 (aa)	-	-
MGP_CASTEiJ_T0039027	-	2906	-	MGP_CASTEiJ_P0039027	216 (aa)	-	P59279
MGP_CASTEiJ_T0039030	-	2619	-	MGP_CASTEiJ_P0039030	193 (aa)	-	-
MGP_CASTEiJ_T0039031	-	576	-	-	- (aa)	-	-
MGP_CASTEiJ_T0039032	-	607	-	MGP_CASTEiJ_P0039032	71 (aa)	-	-
MGP_CASTEiJ_T0039033	-	475	-	MGP_CASTEiJ_P0039033	62 (aa)	-	-
MGP_CASTEiJ_T0039034	-	270	-	MGP_CASTEiJ_P0039034	44 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0020554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0020554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0020554	Rab2b	86	40.323	MGP_CASTEiJ_G0026136	Rab22a	94	40.323
MGP_CASTEiJ_G0020554	Rab2b	81	39.752	MGP_CASTEiJ_G0035073	Rab9b	84	37.870
MGP_CASTEiJ_G0020554	Rab2b	100	83.796	MGP_CASTEiJ_G0027193	Rab2a	100	83.796
MGP_CASTEiJ_G0020554	Rab2b	73	36.620	MGP_CASTEiJ_G0030551	Kras	85	36.420
MGP_CASTEiJ_G0020554	Rab2b	80	39.130	MGP_CASTEiJ_G0035224	Rab9	83	37.870
MGP_CASTEiJ_G0020554	Rab2b	73	35.211	MGP_CASTEiJ_G0032241	Hras	85	35.185
MGP_CASTEiJ_G0020554	Rab2b	92	46.465	MGP_CASTEiJ_G0017380	Rab1a	97	46.465
MGP_CASTEiJ_G0020554	Rab2b	81	45.860	MGP_CASTEiJ_G0019160	Rab15	83	43.182
MGP_CASTEiJ_G0020554	Rab2b	94	32.850	MGP_CASTEiJ_G0015254	Rab23	86	32.850
MGP_CASTEiJ_G0020554	Rab2b	99	45.327	MGP_CASTEiJ_G0023899	Rab1b	98	45.327
MGP_CASTEiJ_G0020554	Rab2b	87	31.250	MGP_CASTEiJ_G0021498	Rabl2	84	31.250
MGP_CASTEiJ_G0020554	Rab2b	90	36.318	MGP_CASTEiJ_G0034188	Rab6b	93	36.318
MGP_CASTEiJ_G0020554	Rab2b	79	44.079	MGP_CASTEiJ_G0023094	Rab5a	78	41.916
MGP_CASTEiJ_G0020554	Rab2b	73	33.803	MGP_CASTEiJ_G0034164	Mras	81	32.544
MGP_CASTEiJ_G0020554	Rab2b	86	46.809	MGP_CASTEiJ_G0034827	Rab39b	88	46.809
MGP_CASTEiJ_G0020554	Rab2b	86	39.474	MGP_CASTEiJ_G0026366	Rab33b	82	39.474
MGP_CASTEiJ_G0020554	Rab2b	81	49.359	MGP_CASTEiJ_G0029079	Rab35	78	48.734
MGP_CASTEiJ_G0020554	Rab2b	78	35.714	MGP_CASTEiJ_G0018075	Rab34	62	35.000
MGP_CASTEiJ_G0020554	Rab2b	78	32.692	MGP_CASTEiJ_G0018866	Dnajc27	58	32.278
MGP_CASTEiJ_G0020554	Rab2b	90	39.691	MGP_CASTEiJ_G0018472	Rab5c	89	39.691
MGP_CASTEiJ_G0020554	Rab2b	95	51.309	MGP_CASTEiJ_G0022763	Rab11b	88	51.309
MGP_CASTEiJ_G0020554	Rab2b	91	39.205	MGP_CASTEiJ_G0023184	Rab31	92	38.587
MGP_CASTEiJ_G0020554	Rab2b	73	35.915	MGP_CASTEiJ_G0026847	Nras	97	36.054
MGP_CASTEiJ_G0020554	Rab2b	85	40.761	MGP_CASTEiJ_G0017200	Rab5b	86	40.761
MGP_CASTEiJ_G0020554	Rab2b	76	41.216	MGP_CASTEiJ_G0034658	Rab33a	69	39.634
MGP_CASTEiJ_G0020554	Rab2b	91	36.139	MGP_CASTEiJ_G0030093	Rab7	91	46.067
MGP_CASTEiJ_G0020554	Rab2b	77	34.839	MGP_CASTEiJ_G0028465	Rheb	92	34.104
MGP_CASTEiJ_G0020554	Rab2b	79	34.568	MGP_CASTEiJ_G0029478	Rasl11a	72	31.818
MGP_CASTEiJ_G0020554	Rab2b	86	47.872	MGP_CASTEiJ_G0023338	Rab18	89	47.872
MGP_CASTEiJ_G0020554	Rab2b	80	47.097	MGP_CASTEiJ_G0023193	Rab12	69	39.500
MGP_CASTEiJ_G0020554	Rab2b	81	48.408	MGP_CASTEiJ_G0026561	Rab25	80	46.784
MGP_CASTEiJ_G0020554	Rab2b	99	46.729	MGP_CASTEiJ_G0033947	Rab11a	91	56.115
MGP_CASTEiJ_G0020554	Rab2b	87	62.032	MGP_CASTEiJ_G0024846	Rab14	93	67.857
MGP_CASTEiJ_G0020554	Rab2b	81	48.718	MGP_CASTEiJ_G0031541	Rab30	84	45.614
MGP_CASTEiJ_G0020554	Rab2b	79	38.710	MGP_CASTEiJ_G0016681	Rab36	61	37.654
MGP_CASTEiJ_G0020554	Rab2b	97	44.041	MGP_CASTEiJ_G0018675	Rab37	89	44.041