EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0020591 (Gene tree)
Gene ID
-
Gene Symbol
Pabpn1
Alias
PAB2|Pab2|Pabp2|Pabp3|mPABII|poly(A) binding protein II
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
7868 bases
Position
chr14:45585430-45593297
Accession
1859158
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0039170RRM_1PF00076.223.9e-1511
MGP_CASTEiJ_P0039175RRM_1PF00076.224.9e-1511
MGP_CASTEiJ_P0039174RRM_1PF00076.221.3e-1411
MGP_CASTEiJ_P0039171RRM_1PF00076.221.4e-1411
MGP_CASTEiJ_P0039172RRM_1PF00076.221.5e-1411
MGP_CASTEiJ_P0039176RRM_1PF00076.228.8e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0039171-1029-MGP_CASTEiJ_P0039171302 (aa)--
MGP_CASTEiJ_T0039170-680XM_006519272MGP_CASTEiJ_P0039170164 (aa)XP_006519335Q8CCS6
MGP_CASTEiJ_T0039173-826-MGP_CASTEiJ_P003917373 (aa)--
MGP_CASTEiJ_T0039172-1777-MGP_CASTEiJ_P0039172319 (aa)--
MGP_CASTEiJ_T0039175-700-MGP_CASTEiJ_P0039175178 (aa)--
MGP_CASTEiJ_T0039174-2533-MGP_CASTEiJ_P0039174292 (aa)--
MGP_CASTEiJ_T0039176-937-MGP_CASTEiJ_P003917642 (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0020591's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0020591's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0020591Pabpn15430.337MGP_CASTEiJ_G0028079-6832.000
MGP_CASTEiJ_G0020591Pabpn19361.538MGP_CASTEiJ_G0033247Pabpn1l5155.102
MGP_CASTEiJ_G0020591Pabpn1100100.000MGP_CASTEiJ_G0020590Gm2052157100.000

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