EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0020993 (Gene tree)
Gene ID: -
Gene Symbol: Zfr
Alias: C920030H05Rik
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 74685 bases
Position: chr15:9334789-9409473
Accession: 1341890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0040367	DZF	PF07528.14	1.2e-69	1	1
MGP_CASTEiJ_P0040372	DZF	PF07528.14	6.6e-66	1	1
MGP_CASTEiJ_P0040367	zf-met	PF12874.7	3.6e-21	1	3
MGP_CASTEiJ_P0040367	zf-met	PF12874.7	3.6e-21	2	3
MGP_CASTEiJ_P0040367	zf-met	PF12874.7	3.6e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0040374	-	666	-	-	- (aa)	-	-
MGP_CASTEiJ_T0040375	-	857	-	-	- (aa)	-	-
MGP_CASTEiJ_T0040367	-	4842	XM_006520057	MGP_CASTEiJ_P0040367	1074 (aa)	XP_006520120	O88532
MGP_CASTEiJ_T0040373	-	933	-	MGP_CASTEiJ_P0040373	43 (aa)	-	-
MGP_CASTEiJ_T0040372	-	897	-	MGP_CASTEiJ_P0040372	298 (aa)	-	-
MGP_CASTEiJ_T0040371	-	565	-	MGP_CASTEiJ_P0040371	114 (aa)	-	-
MGP_CASTEiJ_T0040370	-	513	-	-	- (aa)	-	-
MGP_CASTEiJ_T0040368	-	812	-	MGP_CASTEiJ_P0040368	247 (aa)	-	-
MGP_CASTEiJ_T0040369	-	633	-	MGP_CASTEiJ_P0040369	193 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0020993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0020993	Zfr	100	53.443	MGP_CASTEiJ_G0024893	Strbp	97	46.825
MGP_CASTEiJ_G0020993	Zfr	100	55.853	MGP_CASTEiJ_G0016874	Zfr2	91	51.534