EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_CASTEiJ_G0021348 (Gene tree)
Gene ID
-
Gene Symbol
Apobec3
Alias
APOBEC3|Apobec|Arp3|BC003314|CEM15|Cem15|Gm20117|Rfv-3|Rfv3
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 3
Gene Type
protein_coding
Species
Mus_musculus_casteij
Status
putative
Strand
Plus strand
Length
23000 bases
Position
chr15:80297154-80320153
Accession
1933111
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CASTEiJ_P0041530APOBEC_NPF08210.112e-8012
MGP_CASTEiJ_P0041530APOBEC_NPF08210.112e-8022
MGP_CASTEiJ_P0041531APOBEC_NPF08210.112.6e-8012
MGP_CASTEiJ_P0041531APOBEC_NPF08210.112.6e-8022
MGP_CASTEiJ_P0041533APOBEC_NPF08210.112.8e-8012
MGP_CASTEiJ_P0041533APOBEC_NPF08210.112.8e-8022
MGP_CASTEiJ_P0041526APOBEC_NPF08210.112.7e-2611
MGP_CASTEiJ_P0041525APOBEC_NPF08210.117.8e-2611
MGP_CASTEiJ_P0041534APOBEC_NPF08210.118.9e-2411
MGP_CASTEiJ_P0041530APOBEC_CPF05240.147.9e-5412
MGP_CASTEiJ_P0041530APOBEC_CPF05240.147.9e-5422
MGP_CASTEiJ_P0041531APOBEC_CPF05240.141.3e-5312
MGP_CASTEiJ_P0041531APOBEC_CPF05240.141.3e-5322
MGP_CASTEiJ_P0041533APOBEC_CPF05240.141.5e-5312
MGP_CASTEiJ_P0041533APOBEC_CPF05240.141.5e-5322
MGP_CASTEiJ_P0041525APOBEC_CPF05240.144.5e-2811
MGP_CASTEiJ_P0041526APOBEC_CPF05240.145.3e-2811
MGP_CASTEiJ_P0041534APOBEC_CPF05240.141.8e-2411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CASTEiJ_T0041532-2252-MGP_CASTEiJ_P0041532392 (aa)--
MGP_CASTEiJ_T0041533-1323-MGP_CASTEiJ_P0041533440 (aa)--
MGP_CASTEiJ_T0041530-1980-MGP_CASTEiJ_P0041530407 (aa)--
MGP_CASTEiJ_T0041531-2780-MGP_CASTEiJ_P0041531430 (aa)--
MGP_CASTEiJ_T0041529-1217-MGP_CASTEiJ_P004152946 (aa)--
MGP_CASTEiJ_T0041528-699-MGP_CASTEiJ_P004152879 (aa)--
MGP_CASTEiJ_T0041534-648-MGP_CASTEiJ_P004153485 (aa)--
MGP_CASTEiJ_T0041535-731--- (aa)--
MGP_CASTEiJ_T0041525-746XM_006521551MGP_CASTEiJ_P0041525166 (aa)XP_006521614Q99J72
MGP_CASTEiJ_T0041527-607--- (aa)--
MGP_CASTEiJ_T0041526-813-MGP_CASTEiJ_P0041526151 (aa)--
MGP_CASTEiJ_T0041536-2082--- (aa)--
MGP_CASTEiJ_T0041537-720--- (aa)--
Gene Model
Click here to download MGP_CASTEiJ_G0021348's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0021348's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CASTEiJ_G0021348Apobec39642.169MGP_CASTEiJ_G0030315Aicda9340.110
MGP_CASTEiJ_G0021348Apobec38438.028MGP_CASTEiJ_G0030316Apobec17434.737

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