EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0021397 (Gene tree)
Gene ID: -
Gene Symbol: Sept3
Alias: 3110018K01Rik|AV154067|B530002E20Rik|Sep3
Full Name: septin 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 20920 bases
Position: chr15:82872739-82893658
Accession: 1345148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0041717	MMR_HSR1	PF01926.23	6.1e-08	1	1
MGP_CASTEiJ_P0041718	MMR_HSR1	PF01926.23	6.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0041718	-	2469	-	MGP_CASTEiJ_P0041718	337 (aa)	-	-
MGP_CASTEiJ_T0041717	-	4732	XM_006520992	MGP_CASTEiJ_P0041717	337 (aa)	XP_006521055	Q9Z1S5

Gene Model

Click here to download MGP_CASTEiJ_G0021397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0021397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0021397	Sept3	86	46.575	MGP_CASTEiJ_G0032053	Sept1	100	50.685
MGP_CASTEiJ_G0021397	Sept3	89	49.007	MGP_CASTEiJ_G0015692	Sept2	100	50.000
MGP_CASTEiJ_G0021397	Sept3	87	73.720	MGP_CASTEiJ_G0018749	Sept9	82	75.377
MGP_CASTEiJ_G0021397	Sept3	88	42.088	MGP_CASTEiJ_G0034606	Sept6	68	42.088
MGP_CASTEiJ_G0021397	Sept3	93	43.038	MGP_CASTEiJ_G0017614	Sept8	69	43.038
MGP_CASTEiJ_G0021397	Sept3	89	44.000	MGP_CASTEiJ_G0028867	Sept11	69	44.000
MGP_CASTEiJ_G0021397	Sept3	92	49.682	MGP_CASTEiJ_G0018215	Sept4	92	51.903
MGP_CASTEiJ_G0021397	Sept3	88	43.960	MGP_CASTEiJ_G0016585	Sept10	68	43.960
MGP_CASTEiJ_G0021397	Sept3	74	59.363	MGP_CASTEiJ_G0021739	Sept12	84	56.877
MGP_CASTEiJ_G0021397	Sept3	91	49.186	MGP_CASTEiJ_G0021876	Sept5	78	51.042
MGP_CASTEiJ_G0021397	Sept3	87	49.829	MGP_CASTEiJ_G0033500	Sept7	66	49.829