EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0021561 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 17463 bases
Position: chr15:100292917-100310379
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0042258	DEAD	PF00270.29	2.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0042263	-	609	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042262	-	321	-	MGP_CASTEiJ_P0042262	80 (aa)	-	-
MGP_CASTEiJ_T0042261	-	794	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042260	-	3412	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042258	-	3173	XM_006521493	MGP_CASTEiJ_P0042258	819 (aa)	XP_006521556	D3Z0M9
MGP_CASTEiJ_T0042259	-	3097	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0021561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0021561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0021561	Ddx23	52	37.868	MGP_CASTEiJ_G0034550	Ddx3x	63	37.753
MGP_CASTEiJ_G0021561	Ddx23	53	38.063	MGP_CASTEiJ_G0016265	D1Pas1	63	38.063
MGP_CASTEiJ_G0021561	Ddx23	54	30.243	MGP_CASTEiJ_G0018172	Ddx52	70	30.222
MGP_CASTEiJ_G0021561	Ddx23	52	40.139	MGP_CASTEiJ_G0019865	Ddx41	75	37.400
MGP_CASTEiJ_G0021561	Ddx23	54	40.757	MGP_CASTEiJ_G0034068	Ddx43	63	40.757
MGP_CASTEiJ_G0021561	Ddx23	51	31.175	MGP_CASTEiJ_G0033719	Ddx6	77	31.159
MGP_CASTEiJ_G0021561	Ddx23	51	39.110	MGP_CASTEiJ_G0021336	Ddx17	60	39.110
MGP_CASTEiJ_G0021561	Ddx23	50	30.900	MGP_CASTEiJ_G0021938	Eif4a2	92	30.900
MGP_CASTEiJ_G0021561	Ddx23	52	35.417	MGP_CASTEiJ_G0015890	Ddx59	64	35.417