EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0021674 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 33578 bases
Position: chr15:104533440-104567017
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0042574	KH_1	PF00013.29	1.6e-49	1	3
MGP_CASTEiJ_P0042574	KH_1	PF00013.29	1.6e-49	2	3
MGP_CASTEiJ_P0042574	KH_1	PF00013.29	1.6e-49	3	3
MGP_CASTEiJ_P0042576	KH_1	PF00013.29	2.1e-49	1	3
MGP_CASTEiJ_P0042576	KH_1	PF00013.29	2.1e-49	2	3
MGP_CASTEiJ_P0042576	KH_1	PF00013.29	2.1e-49	3	3
MGP_CASTEiJ_P0042575	KH_1	PF00013.29	2.4e-49	1	3
MGP_CASTEiJ_P0042575	KH_1	PF00013.29	2.4e-49	2	3
MGP_CASTEiJ_P0042575	KH_1	PF00013.29	2.4e-49	3	3
MGP_CASTEiJ_P0042574	KH_2	PF07650.17	2e-14	1	1
MGP_CASTEiJ_P0042576	KH_2	PF07650.17	2.6e-14	1	1
MGP_CASTEiJ_P0042575	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0042576	-	2747	-	MGP_CASTEiJ_P0042576	349 (aa)	-	-
MGP_CASTEiJ_T0042575	-	2786	-	MGP_CASTEiJ_P0042575	362 (aa)	-	-
MGP_CASTEiJ_T0042574	-	2693	XM_006520582	MGP_CASTEiJ_P0042574	331 (aa)	XP_006520645	Q61990

Gene Model

Click here to download MGP_CASTEiJ_G0021674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0021674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0021674	Pcbp2	68	33.333	MGP_CASTEiJ_G0023154	Khsrp	51	33.333
MGP_CASTEiJ_G0021674	Pcbp2	97	59.877	MGP_CASTEiJ_G0034226	Pcbp4	98	66.321
MGP_CASTEiJ_G0021674	Pcbp2	95	35.556	MGP_CASTEiJ_G0021927	Igf2bp2	62	35.556
MGP_CASTEiJ_G0021674	Pcbp2	84	44.444	MGP_CASTEiJ_G0019896	Hnrnpk	78	31.724
MGP_CASTEiJ_G0021674	Pcbp2	68	41.096	MGP_CASTEiJ_G0030795	-	50	41.096
MGP_CASTEiJ_G0021674	Pcbp2	100	81.744	MGP_CASTEiJ_G0030066	Pcbp1	100	81.744
MGP_CASTEiJ_G0021674	Pcbp2	69	39.726	MGP_CASTEiJ_G0019013	Nova1	53	39.726
MGP_CASTEiJ_G0021674	Pcbp2	99	78.338	MGP_CASTEiJ_G0016721	Pcbp3	99	82.143