EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0021677 (Gene tree)
Gene ID: -
Gene Symbol: Tarbp2
Alias: Prbp|TRBP
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 5479 bases
Position: chr15:104585809-104591287
Accession: 103027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0042591	dsrm	PF00035.26	1e-33	1	2
MGP_CASTEiJ_P0042591	dsrm	PF00035.26	1e-33	2	2
MGP_CASTEiJ_P0042596	dsrm	PF00035.26	2.4e-32	1	2
MGP_CASTEiJ_P0042596	dsrm	PF00035.26	2.4e-32	2	2
MGP_CASTEiJ_P0042598	dsrm	PF00035.26	2.8e-32	1	2
MGP_CASTEiJ_P0042598	dsrm	PF00035.26	2.8e-32	2	2
MGP_CASTEiJ_P0042588	dsrm	PF00035.26	2.8e-17	1	1
MGP_CASTEiJ_P0042596	DND1_DSRM	PF14709.7	5.9e-11	1	1
MGP_CASTEiJ_P0042598	DND1_DSRM	PF14709.7	9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0042596	-	1081	-	MGP_CASTEiJ_P0042596	225 (aa)	-	-
MGP_CASTEiJ_T0042586	-	1817	XM_006520719	MGP_CASTEiJ_P0042586	79 (aa)	XP_006520782	P97473
MGP_CASTEiJ_T0042587	-	1033	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042595	-	713	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042594	-	951	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042588	-	1278	-	MGP_CASTEiJ_P0042588	274 (aa)	-	-
MGP_CASTEiJ_T0042589	-	2732	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042591	-	1523	-	MGP_CASTEiJ_P0042591	365 (aa)	-	-
MGP_CASTEiJ_T0042590	-	370	-	MGP_CASTEiJ_P0042590	49 (aa)	-	-
MGP_CASTEiJ_T0042593	-	420	-	MGP_CASTEiJ_P0042593	56 (aa)	-	-
MGP_CASTEiJ_T0042592	-	704	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042599	-	707	-	-	- (aa)	-	-
MGP_CASTEiJ_T0042597	-	482	-	MGP_CASTEiJ_P0042597	58 (aa)	-	-
MGP_CASTEiJ_T0042598	-	782	-	MGP_CASTEiJ_P0042598	243 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0021677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0021677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0021677	Tarbp2	91	54.717	MGP_CASTEiJ_G0025060	Prkra	94	42.614